Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03367 ATGGATGAGATTTTGTCTTCCACAAATGTCACTCAAGATGTTGGTTCAATCTCCGATGAAAATAAAGAATCGTGGCAACATTTTGTCTTCCACGACCTTTCATCAATCAAGGATTTCTACGCTAAATACGCTCATGAAAGGGGATTTTCTTTGAGAAGAAATTTGCACTCCTTCTATGATTCTCGTAACAGAAAAATGGACATTGTGCAATATGTCCGTTATGTTTGTAACAAGCATGTTTTCAAGCATGAGAGTCGGGCGGATCCTAAGAACAAAACAAACTCGGATACTCCTGTTCTCATTGAATATCAGAAAGAGAAAGAACTTCCCGAGGAAAGGACTGGTTGCCCGGCTAGTATTTCGTTGAAGTATGATTCCAATGTTAAAGGTTATCACATATACAAATGGAATGTTACTCATAACCACCCTCTCCATAAACCTGAGCATTCACATTACCTGAGATCTGCTCGAGAGATTAGTGAGCCTCAAAAACAACTTGCTATAATAAATTCAAAATCAGGCATGTCTGTAAGATTCTCCTTTCAAGTTATGCGTCAAATAGCTGGTGGTTCAAAGAACCTTGGGTATTGGTTCCAAGATTTAAAGAACTTTCTCACCACTGTTTAA 627 0.3828 MDEILSSTNVTQDVGSISDENKESWQHFVFHDLSSIKDFYAKYAHERGFSLRRNLHSFYDSRNRKMDIVQYVRYVCNKHVFKHESRADPKNKTNSDTPVLIEYQKEKELPEERTGCPASISLKYDSNVKGYHIYKWNVTHNHPLHKPEHSHYLRSAREISEPQKQLAIINSKSGMSVRFSFQVMRQIAGGSKNLGYWFQDLKNFLTTV 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03367 208 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 14 191 - -
Vivi3g03367 208 Pfam FAR1 DNA-binding domain 38 145 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03367 Vivi-Chr3 56705900 56706526 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi3g03367 FAR1 4.8e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03367 - - vvo:131658110 433.335