Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03339 ATGACGACAGGTAGAGATGGAGATTATCACCATCACAAATTCAGGGACAGTGAGTCTGATTTTGATATTTCCAGGCGTGGTTTTACTGATAATAATTTTAATGAGTATGACGGGGTTAGAAATGGTAAGGGTCGGAGGAGGGATTCGAGAGATAGAATTATTATGAGGGAGAGAGAAATTTCAAATGGTAGTTACCGGTCATCTTCGAGTAGGAGTGGCTCTAGCAGTAGTGGCGGCCTTAGTGGCAGGCTTGGTCCTAGAAGATGTGATTTTTCTGTCAAGACTATGGATAGAGAGCCGGGTGAACTTTCTAGTGAGAGTGGATCCGACGTTGAAGCAGAGTCACTGGTAAAACGCCATAAGGTTGTGATGGGTAAAGAGTTTGATTATGATGTTGAATCAGAATCACTCTTAAAACACCATGAGGTTGCAATGGGCAAAGAAAATGGGACTGGATCTCCGTTACAAAGGAAAAGGAAATTTTCACCAATAGTATGGGATCAAGATGACCATAAAGTGACTAATTTATCCAAGCTTAAGGTTGTCACAACAACAGTGACTGCTGTTGCTTGTCCACCTCCATTTCCAAGAGCAGTCGACGAGTCGGCTGATGTTCCTTACAATGGAGTTGAAGTTCATCCTCCTGAGAATCTTGTGTTGCCGACTGCAGTGGATCCTTCTATGGTGACTGAGTCAGTTCAAAATGCCGAACCTGAGTCTCCTATAGGTTTGCGTTCGTCTGAGCAGAGGTTGGTTAATGGGAACACTGAGCAACCAGAAGTTGAAGATTACGTTTCAACTCACAATATATCATCTTCAAGATGGGCATCTGGAGATGGCTCTTCGGATGATGAAGGTGAAATCATTGATGGGAAGGAAGGCCTTAAAAAGAGGAGGCTATCTCTTGAGGCGGGTGTGAGAATACGAAACAAGATGTTGAAACCAGAGGAATCTAAAATTGCAGGTTTTGAAATGTCTAGAGCCAAATCATCCGAATCTGAAGAAAGAGGTAGCACTGGGAGATATTCCGGTGAGGATGACTATCCTGGTATTGAGGCAGGGAAGGATAACTACATGGAGATTGACAGCGGAGTTTGCAAAAGTGATCCAAGTGGTAGTCACACAAATACTGATTCTGAACGCGAAGATGATTGCAGGGAAAGTATGGAACCTCCGTCTCCACCCCAGAGAGTTGTCAACATGCTTCAGGGATGTAGAAGTGTTGATGAGTTTGAGAGACTGAACAAGATTGATGAAGGAACATATGGTGTTGTATATAGGGCCAAAGACAAGAAGACCGGTGAAATAGTGGCACTGAAAAAGGTTAAGATGGAGAAGGAAAAAGAAGGCTTTCCACTGACTTCTCTGAGGGAAATAAACATACTTCTTTCCTTTCATCATCCATTCATAGTTGACGTTAAGGAAGTAGTGGTAGGTAGTAGCCTTGATAGTATTTTTATGGTTATGGAATACATGGAACACGATCTTAAAGGGCTAATGGAGGCAATGAAGCAGCCATTTAGCCAGAGTGAAGTAAAATGCTTAATGCTCCAGCTGTTAGAAGGTGTGAAGTATCTTCACGACAACTGGGTGCTTCACAGGGACTTGAAGACCTCAAACCTGCTTCTGAATAATAGGGGCGAGTCAAAAATTTGTGATTTCGGATTAGCTCGTCAGTATGGGAGTCCATTGAAACCTTATACATCATTGGTGGTTACTCTTTGGTACAGGGCTCCTGAACTTCTTTTGGGGACAAAGCAGTATTCAACAGCGATCGACATGTGGTCCTTGGGTTGTATAATGGCCGAGCTTTTGTCCAAGGAACCATTGTTTAATGGGAGGACTGAATTTGATCAACTTAACAAGATTTTCAGAATTCTTGGCACCCCAAATGAAACAATTTGGCCTGGGTTCTCAAAATTGCCTCTAGTCAAGGCCAATTATGTCAAGCACCAGTATAATCTCCTGCGCAAAAAGTTTCCCGCAACATCATTCACTGGATCCCCAGTTCTTTCTGATTCTGGATTTGATTTGTTGAACAAGCTTCTCACTTATGACCCTGAAAAGAGGATCACTGCTGAAGATGCTCTCAACCATGAATGGTTTCGTGAAGTTCCCCTTCCCAAATCTAAAGAATTCATGCCTACATTTCCTGCTCAACATGATAAAGAAAGGAGAATGCGAAGAATGATGAAGAGTCCACATCCGTTAGAGAAGCACCGGAAGGATTTGCAGCTGGGGGAATCAGGAACCGGTAGTATTTTTGGTTAA 2271 0.4289 MTTGRDGDYHHHKFRDSESDFDISRRGFTDNNFNEYDGVRNGKGRRRDSRDRIIMREREISNGSYRSSSSRSGSSSSGGLSGRLGPRRCDFSVKTMDREPGELSSESGSDVEAESLVKRHKVVMGKEFDYDVESESLLKHHEVAMGKENGTGSPLQRKRKFSPIVWDQDDHKVTNLSKLKVVTTTVTAVACPPPFPRAVDESADVPYNGVEVHPPENLVLPTAVDPSMVTESVQNAEPESPIGLRSSEQRLVNGNTEQPEVEDYVSTHNISSSRWASGDGSSDDEGEIIDGKEGLKKRRLSLEAGVRIRNKMLKPEESKIAGFEMSRAKSSESEERGSTGRYSGEDDYPGIEAGKDNYMEIDSGVCKSDPSGSHTNTDSEREDDCRESMEPPSPPQRVVNMLQGCRSVDEFERLNKIDEGTYGVVYRAKDKKTGEIVALKKVKMEKEKEGFPLTSLREINILLSFHHPFIVDVKEVVVGSSLDSIFMVMEYMEHDLKGLMEAMKQPFSQSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNRGESKICDFGLARQYGSPLKPYTSLVVTLWYRAPELLLGTKQYSTAIDMWSLGCIMAELLSKEPLFNGRTEFDQLNKIFRILGTPNETIWPGFSKLPLVKANYVKHQYNLLRKKFPATSFTGSPVLSDSGFDLLNKLLTYDPEKRITAEDALNHEWFREVPLPKSKEFMPTFPAQHDKERRMRRMMKSPHPLEKHRKDLQLGESGTGSIFG 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03339 756 MobiDBLite consensus disorder prediction 322 396 - -
Vivi3g03339 756 MobiDBLite consensus disorder prediction 1 88 - -
Vivi3g03339 756 ProSitePatterns Serine/Threonine protein kinases active-site signature. 531 543 IPR008271 GO:0004672|GO:0006468
Vivi3g03339 756 MobiDBLite consensus disorder prediction 732 756 - -
Vivi3g03339 756 MobiDBLite consensus disorder prediction 61 81 - -
Vivi3g03339 756 MobiDBLite consensus disorder prediction 732 746 - -
Vivi3g03339 756 MobiDBLite consensus disorder prediction 322 353 - -
Vivi3g03339 756 FunFam Cyclin-dependent kinase G-2 494 733 - -
Vivi3g03339 756 MobiDBLite consensus disorder prediction 39 59 - -
Vivi3g03339 756 SUPERFAMILY Protein kinase-like (PK-like) 403 708 IPR011009 -
Vivi3g03339 756 Gene3D Transferase(Phosphotransferase) domain 1 494 736 - -
Vivi3g03339 756 MobiDBLite consensus disorder prediction 231 279 - -
Vivi3g03339 756 MobiDBLite consensus disorder prediction 374 390 - -
Vivi3g03339 756 Gene3D Phosphorylase Kinase; domain 1 396 493 - -
Vivi3g03339 756 PANTHER CELL DIVISION PROTEIN KINASE 409 708 - -
Vivi3g03339 756 ProSiteProfiles Protein kinase domain profile. 411 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g03339 756 Pfam Protein kinase domain 411 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g03339 756 CDD STKc_CDC2L1 405 702 IPR045267 GO:0004674|GO:0005524|GO:0006468
Vivi3g03339 756 MobiDBLite consensus disorder prediction 231 290 - -
Vivi3g03339 756 SMART serkin_6 411 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g03339 756 MobiDBLite consensus disorder prediction 1 25 - -
Vivi3g03339 756 FunFam cyclin-dependent kinase G-2 isoform X1 396 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03339 Vivi-Chr3 56230746 56234789 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03339 402 745 Core Cell Cycle Gene Families AT5G10270 45.125 2.44e-95 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Vivi3g03339 Pkinase 2.6e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03339 K08818 - gmx:100793729 974.156