Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03282 ATGGCGGCTCTATTACCTTGCACACCGACTCTACTCTATGCTCCGTTTGCGAGCCGGAGGAGGAGCCATCTTCCGCTTAAACCTCACTCACAAGCCTTCTCTGGGTCTACGAAACGGTTTCTTCGCGGTTCTCTTTCCGTTGCCCGGTTCGGATTACAGCCCGGTGTTTTACCCGAACCGGATGACGCCGAATTTGTTGTCAGGGAATTGATTAACCGAGCGGAGGGTTTGCTTTATACAATTGCCGATGCTGCTGTTTCGTCTTCCGATACGGTGGTAACCACCACCGCTGCGAAACAGAGTAACGATTGGCTTTCGGGAATTACCAATTTTATGGAGACGATTCTCAAGGTATTCAAGGATGGACTTTCTACTTTGCATGTGCCGTATGCATATGGTTTTGCAATTATAATGCTCACTGTTCTTGTAAAAGCGGCCACATTTCCGTTGACAAGAAAGCAGGTAGAATCTGCCATGGCTATGCGATCTTTGCAACCTCAAGTAAAGGCTATCCAGAAACAGTATGCTGGGGATCAGGAGAGAATTCAACTTGAAACCGCTCGGTTATATAAATTAGCCAACATTAATCCTCTAGCAGGATGCCTGCCTCTTCTCTTAACAACACCAGTGTGGATCGGGCTATATCGAGCCTTTTCTAATGTGGCAGATGAGGGACTCCTTAACGAAGGCTTCTTTTGGATACCTTCTCTTTCTGGTCCTACTACAATTGCAGCTCGGCAAAATGGAAGTGGCATCTCTTGGCTTTTTCCTTTTGTGGATGGACACCCTCCCCTTGGATGGCCAGATACACTGGCTTACCTTGTCTTGCCTGTTTTACTGGTTGTCTCTCAATACATTTCTCTTCAAATAATTCAGTCATCTCAGGCTACTGACCCCAACGTGAAGAGTTCTCAAATCTTAAACAAGTTCCTTCCATTAGTGATTGGTTATTTTTCTCTTTCGGTTCCTTCTGGTCTTAGCCTTTACTGGTTCACAAATAATATATTGAGCACTTTACAGCAAATATGGCTTCAAAAGTTAGGAGGTGCAAAAAATCCTTTGAGACAAGTTCTAGATGATAATCTGAAAAATGACCTAATACAGACTATGAAGCCAGTATCTAAATTAAATTCCACAAAAGTTGAAGAAACTAGAAAAGTTGAAAAGTTGACATCAGAGGGGCCACAACCTGGTGACAGATTTAAGCAATTAATGGAGCAAGAGGCAAGGAAGAAACAAAAGAGAGAAGAAGAAAAAAGGAAGGCTGAAGCAGCAGCAGCTAAAGCTAATCAGGAGCAAACAATTGAAGGGGAAAATCAAGCTGTAAACGACTTAGTTGAAAATTCCCAACCCGCGGCTGCTGATACTTATCCATCTATATCGGGAGTAGTAAATGGTAATCCATTAAGTAAGGACTTGGAGGGAAATCAGAATTCTACATCCACATCTGATACTGAAAATGATGAAGGTTCTTCTCATTTCAATGCAGTAAACGAGAAAACTCTAGAAAAGGAACCAAGAGAAGTACTAACAACCACAGCTACTACAAACAAGCAACCTCAAGGAGAGGATTCAGATCACGTGGCAAAGGATTGA 1596 0.4298 MAALLPCTPTLLYAPFASRRRSHLPLKPHSQAFSGSTKRFLRGSLSVARFGLQPGVLPEPDDAEFVVRELINRAEGLLYTIADAAVSSSDTVVTTTAAKQSNDWLSGITNFMETILKVFKDGLSTLHVPYAYGFAIIMLTVLVKAATFPLTRKQVESAMAMRSLQPQVKAIQKQYAGDQERIQLETARLYKLANINPLAGCLPLLLTTPVWIGLYRAFSNVADEGLLNEGFFWIPSLSGPTTIAARQNGSGISWLFPFVDGHPPLGWPDTLAYLVLPVLLVVSQYISLQIIQSSQATDPNVKSSQILNKFLPLVIGYFSLSVPSGLSLYWFTNNILSTLQQIWLQKLGGAKNPLRQVLDDNLKNDLIQTMKPVSKLNSTKVEETRKVEKLTSEGPQPGDRFKQLMEQEARKKQKREEEKRKAEAAAAKANQEQTIEGENQAVNDLVENSQPAAADTYPSISGVVNGNPLSKDLEGNQNSTSTSDTENDEGSSHFNAVNEKTLEKEPREVLTTTATTNKQPQGEDSDHVAKD 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03282 531 MobiDBLite consensus disorder prediction 508 522 - -
Vivi3g03282 531 Pfam 60Kd inner membrane protein 132 346 IPR028055 -
Vivi3g03282 531 MobiDBLite consensus disorder prediction 378 395 - -
Vivi3g03282 531 CDD 5TM_YidC_Alb3 133 346 IPR047196 -
Vivi3g03282 531 Coils Coil 373 393 - -
Vivi3g03282 531 PANTHER OXA1 82 420 IPR001708 GO:0016020|GO:0032977
Vivi3g03282 531 Coils Coil 401 448 - -
Vivi3g03282 531 MobiDBLite consensus disorder prediction 456 531 - -
Vivi3g03282 531 MobiDBLite consensus disorder prediction 403 426 - -
Vivi3g03282 531 NCBIfam membrane protein insertase YidC 132 346 IPR028055 -
Vivi3g03282 531 MobiDBLite consensus disorder prediction 456 497 - -
Vivi3g03282 531 MobiDBLite consensus disorder prediction 377 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03282 Vivi-Chr3 55532986 55539034 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03282 62 419 Chloroplast and Mitochondria Gene Families AT2G28800 52.500 2.60e-128 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03282 K03217 - gmx:100802546 736.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03282 3 55532986 55539034 Vivi3g03282 3 55532986 55539034 ECH