Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03255 ATGAGGGAGGTAGTTGCTATAAAAGTTGTGAGGAGTATAAAGAAATATCGTGAAGCAGCAATGTTAGAAGTTGATGTGCTCCAGTTGCTTGGGAAGTATGACAGGAATGGCAATCGCTGTGTTCAAATACGCAACTGGTTTGACTACCGGAACCATATTTGTATTGTATTTGAGATGCTTGGACCAAGCTTATATGATTTTCTCCGGAAGAACAATTATCGCCCGTTTCCGGTTGATCTTGTCCGCGAGCTAGGAAGACAATTGTTGGAAAGTGTAGCTTTTGTACATGATATGCGCCTCATCCACACTGACTTGAAGCCTGAGAATATACTTTTTATTTCCGCAGAATATGTAAAAGTGCCTGACTACAAGGTCATGTTCCGGTCGCCAAAAGAGGGAGCCTCTTATAAAAGACTGCCAAAATCAAGTGCTATTAAGGTTATTGATTTTGGTAGTACTGCTTATGAGCACCAAGATCACAACTATATCGTCTCTACTAGGCATTATAGGGCCCCTGAGGTTATTCTTGGACTTGGTTGGGGTTTTCCTTGTGACATATGGAGTATTGGTTGCATTTTGGTTGAGTTGTGCTCGGGAGAAGCTTTGTTTCAGACGCATGAGAATTTAGAGCATCTAGCTATGATGGAGAGGGTTTTAGGCCCAATGCCTCAGGACATGTTGAAAAGAGCAGACCGCCCCGCAGAGAAGTATGTCAGAAGAGGTAGACTTAACTGGCCCGAAGGAGCAGTCTCCCGAGAAAGCATCAAAGCTGTCTTGAAACTACCCCGTCTTCCTAATCTGGTGATGCAGCATGTGGATCACTCGGCTGGGGATCTTCTTGATCTTTTGCAGGGTCTACTTCGGTTTGACCCCATGAGCAGGATGAAGGCTCATGAAGCACTCAGGCATCCCTTTTTTACTGGGGGGCATTACCAGAGGTATTAA 945 0.4455 MREVVAIKVVRSIKKYREAAMLEVDVLQLLGKYDRNGNRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVRELGRQLLESVAFVHDMRLIHTDLKPENILFISAEYVKVPDYKVMFRSPKEGASYKRLPKSSAIKVIDFGSTAYEHQDHNYIVSTRHYRAPEVILGLGWGFPCDIWSIGCILVELCSGEALFQTHENLEHLAMMERVLGPMPQDMLKRADRPAEKYVRRGRLNWPEGAVSRESIKAVLKLPRLPNLVMQHVDHSAGDLLDLLQGLLRFDPMSRMKAHEALRHPFFTGGHYQRY 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03255 314 Gene3D Transferase(Phosphotransferase) domain 1 33 306 - -
Vivi3g03255 314 Pfam Protein kinase domain 3 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g03255 314 ProSiteProfiles Protein kinase domain profile. 1 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g03255 314 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 2 308 - -
Vivi3g03255 314 FunFam Serine/threonine-protein kinase AFC2 55 306 - -
Vivi3g03255 314 ProSitePatterns Serine/Threonine protein kinases active-site signature. 100 112 IPR008271 GO:0004672|GO:0006468
Vivi3g03255 314 SUPERFAMILY Protein kinase-like (PK-like) 3 310 IPR011009 -
Vivi3g03255 314 SMART serkin_6 3 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g03255 314 CDD PKc_CLK 2 306 - -
Vivi3g03255 314 Gene3D Phosphorylase Kinase; domain 1 3 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03255 Vivi-Chr3 55186862 55190669 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03255 51 310 MAP Kinase Gene Family AT4G01370 29.963 3.83e-22 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Vivi3g03255 Pkinase 1.2e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03255 K08287 - zju:107428513 573.548