Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03199 ATGACGCTTCTCCTCCCACAATCTCTCTTCTTCACCGCACCCACCATTGCTCCCGTCACATATTTTCAAACTCCGATCCGACTTCAGACCTTCGGCTCCTTCACGATCCGATGCACCAACCAGTTTCATCTCCAACTCCGCCAACCCGAATGCGACATCCAGAAACGCGTAGTCAGCAGTGATCTCAACTTCGACTCTATCCTTTCAGCGGTGGAGCTTTCCTGCCTGGTTTCGTCAGCGATTTTTTCTGCTGCTCTGACGGTAAATGGATCGAAGAATTGGTTGATGATGGTGAGTGGTAACAGAGTTAATGCTGTGTGGGGGGTTTTGATATTGGTAGGTGGTGTTGCGGCTGGGGTGTTGCTTCGGAGGCGGCAATGGAAGAGTATGGAAGGTGGATTGATGGAGAGGGTTGAGAAATTGGAGGATGATTTGAGGAAGACGGTGAGAGTTATTAGGATATTGTCGAGGCATGTTGAGAAATTGGGGAAAAGGCTTTGGGTTCCTAAGGAACCCATCACTCAGTCTGCAGATCTAGCACAGAAGAACTCTGAGGCCACAAGAGCTATAGCGGTAAAATATGAAATTTTGGAGAAAGAGATTCATGAAATTCAAAAAGTTTTACTAGCGTTACAGGAACAACAACAAAAACAATTTGATCTGATTCTCTCGCTTAAGCCGTGGGAAAGCAAACGCAAAACTCCCAAAGAGGAAGATATATTACAAACTACTAACTCAGCTGAGGATGAGGTGATAAAGCATGTGGAAGATCACCAAATCTGA 783 0.4585 MTLLLPQSLFFTAPTIAPVTYFQTPIRLQTFGSFTIRCTNQFHLQLRQPECDIQKRVVSSDLNFDSILSAVELSCLVSSAIFSAALTVNGSKNWLMMVSGNRVNAVWGVLILVGGVAAGVLLRRRQWKSMEGGLMERVEKLEDDLRKTVRVIRILSRHVEKLGKRLWVPKEPITQSADLAQKNSEATRAIAVKYEILEKEIHEIQKVLLALQEQQQKQFDLILSLKPWESKRKTPKEEDILQTTNSAEDEVIKHVEDHQI 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03199 260 Coils Coil 194 217 - -
Vivi3g03199 260 PANTHER TRANSMEMBRANE PROTEIN 29 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03199 Vivi-Chr3 54333372 54334839 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03199 58 225 Eukaryotic Initiation Factors Gene Family AT5G65250 48.619 9.54e-39 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03199 - - psat:127082940 385.571