Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03140 ATGGTGGTGATCAGCGAAGAAACCGACCCTTATGCAGTAGAAGAAACCGAAGAGGGAACAGAAACTGAAATCGAAAGTGTGGACTATGAGGAGCTGAAGAAACGCATGTGGAAGGACAAGATCCTTCTACAAAAATTCAAGGAAAAGCAAGAGAATAACACTGAACCTGAGCAACAAGCGAAACAAGAGGCGTCTAGGAGGAAAAAGATGGCAAGAGCACAAGATTCAGTACTCAAATACATGGCAAAAATCATGGATGTTTGCAAAGCTAAAGGTTTCGTCTACGGAATCATCCCAGAAAAAGGTAAACCGGTATCAGGCTCCTCGGATAGTTTGCGCGAATGGTGGAAAGATCAAATCCGTTTCGATCAAAGCGCGCCTCTAGCGGTCGCGAAATACTTACCGCTTCTTGGAAAAGACGAGCAACTTAATACTATGATGGATGATCCAAACTCTTACATACACCTCCTCCAAGATTTACAAGATGCAACGCTTGGTTCGCTTCTTTCGGCTTTAATGCAACATTGTGTGCCACCGCAGAGAAGGTTTCCTCTGGATAGAGGAATATCTCCTCCGTGGTGGCCCACAGGATCGGAGATTTGGTGGGGCGAACAAGGCTTATTGGCTCAAGAACAAGGTCCGCCGCCTTATAAAAAGCCGCATGATCTTAAAAAAGCATGGAAAGTTTCTGTTTTAGCTGGTGTTATAAAGCATATTTCACCTGATTTGGAGAAGCTAAGGAGATTGGTTACTCAGTCTAAGACTTTGCAGGATAAGATGACAGCAAGAGATAGTGCTACTTGGTGCAAGGTTATGAACCAAGAGGAAGCTTTGCTTGGTGTGACTAATAAGTGTTTTAAAATGTCTATTTCGGAGGAAGGTGAAAGTTCTAATGGTAGTAGTAGTAGCAGTAGCAGAAGCGAGAAAAGGAAGTGTGTGTTCGATGTTGGTGGCGAAGATGGAGAGTTTCCACAGAATAAGTTACCTTTGAGTTTTGCAAATTTGCTTGATTGTGAAGCAAGAATTGAAAATGTGGATGAGTGGTTGAAAGTGGGAGATATTGAAGGTGGGAAATTTGGATGGGAGGTAGAACATTGGTTGAATGATGTGGATGATGTTGAATTGGAAGCTGCACTTGAAATGTTGAAAGGTAATCACAACATGGATTTTATTCCTCAAAATCCAGCACATAATTTGCATGGCCAAGAGGAAGAAAACTCTCTTTGGGACTTTAGATATCAATACCATCCAGAATAA 1257 0.4224 MVVISEETDPYAVEETEEGTETEIESVDYEELKKRMWKDKILLQKFKEKQENNTEPEQQAKQEASRRKKMARAQDSVLKYMAKIMDVCKAKGFVYGIIPEKGKPVSGSSDSLREWWKDQIRFDQSAPLAVAKYLPLLGKDEQLNTMMDDPNSYIHLLQDLQDATLGSLLSALMQHCVPPQRRFPLDRGISPPWWPTGSEIWWGEQGLLAQEQGPPPYKKPHDLKKAWKVSVLAGVIKHISPDLEKLRRLVTQSKTLQDKMTARDSATWCKVMNQEEALLGVTNKCFKMSISEEGESSNGSSSSSSRSEKRKCVFDVGGEDGEFPQNKLPLSFANLLDCEARIENVDEWLKVGDIEGGKFGWEVEHWLNDVDDVELEAALEMLKGNHNMDFIPQNPAHNLHGQEEENSLWDFRYQYHPE 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03140 418 MobiDBLite consensus disorder prediction 292 307 - -
Vivi3g03140 418 MobiDBLite consensus disorder prediction 47 68 - -
Vivi3g03140 418 FunFam Ethylene insensitive 3-like 1 148 285 - -
Vivi3g03140 418 MobiDBLite consensus disorder prediction 292 311 - -
Vivi3g03140 418 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 14 315 IPR006957 GO:0003700|GO:0005634
Vivi3g03140 418 SUPERFAMILY DNA-binding domain of EIN3-like 154 278 IPR023278 GO:0003700|GO:0005634
Vivi3g03140 418 MobiDBLite consensus disorder prediction 1 25 - -
Vivi3g03140 418 Pfam Ethylene insensitive 3 30 276 IPR047091 GO:0003700
Vivi3g03140 418 Gene3D - 59 143 IPR023278 GO:0003700|GO:0005634
Vivi3g03140 418 Gene3D - 147 284 IPR023278 GO:0003700|GO:0005634
Vivi3g03140 418 MobiDBLite consensus disorder prediction 10 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03140 Vivi-Chr3 53418767 53420327 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03140 25 280 EIL Transcription Factor Family AT5G65100 61.679 8.00e-121 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Vivi3g03140 EIN3 3e-114 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03140 K14514 - gmx:100817300 451.825