Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03134 ATGAGTCCATCAACACTATCTCTTCCACCTCTAGAAGTGTTGATGGACCTTGAGAATGAGAACAATGGTAGAGAAACCAGAAAACTATGGGTGCTGAATCCTCCAGAGCCACCATGCATGCTGCATCGAGTCGCGGATAATATCAAGGACAGCGTCTTACATTGTCCGAATCCGAACAGATTCTTTTCTCTCAAACATCAACCTTTGGATAAAACAGTGTTACCTTTGTTGCATGGTTTATTTCCCATTCTTAAGTCATTAAAAAACTATGATGTTGATAAGTTCAAGTGTGACGTATTGGCGGGTTTAATCCTCGCAATCTTCGCTATTCCTCAGGCTATGGGAAATGCGAGTTTGGCGAAGATGAGTCCTGAATATGGCCTATATACAAGTGTCGTTCCGCCTATTATTTATGCTTTGTTGGCGAGTTCGAGGGAGATAGTAATAGGACCTGTAACTGTGGACTCATTGCTACTTTCTTCAATGATTCAAACATTGAAAGATCCTGTAAATGATTCAGTTGCTTATACTCAACTTGTTTTGACTGCAACTTTTTTTACTGGTATCTTCCAAGTTGCTTTCGGATTCCTCAGATTTGGATTTCTGGTGGATTATCTTTCTCATGCAACGATCATCGGGTTTTTGGCTGCAGTAGCCATAGGCATTGTATTACAACAATTGAAAGCATTATTCGGAATCACCAACTTTACCAATAAAACCGATTTAATCTCTGTGATTAAATCTCTTTGGACATCTTACATAAACCAATCAGAATGGCATCCTTACAATTTTATCATTGGATTCTCATTTTTGTCTTTCATCATATTTACTAGATTACTGGGGAAAAGGAAAAAGAAATTCTTGTGGCTATCACACATGGCTCCTCTTGTTTCATTCATTATATCAACTGTTATAGCATATAGAGTAAATGTTCATCAACCCAAACTCGAAGACTATAAAATCGAAGTTTTAGGACCGATCAAAGGAGGTAGTTTGAATCCAAGTTCACTCAATCAATTACAGCTTGATAGTAATGGTGAATATTTGGGTCCTTTGATCAAAATAGCATTGACAGTTGCGATTATCTCAACCACGGAATCTATAGCTGTTGCAAGAATATATGCATCACTAAGAGGTTACAATATTGATCCAAATAGAGAAGTTCTATCCTTAGGGATAATGAACATTTTTGGATCATTCACTTCTTGCTATGTTGCATCAGGTTCTATTGCTCGTACGGCTGTAAACTATAACGCTGGCTCGCAAACAACGGTGTCAAGCATAGTGATGGCGCTCACGGTGTTGACGTCGCTTAAATTTTTGACAAAACTATTATATTTCACTCCGAAAGCAATGCTAGCAGCAATAATTCTTTCAGCTGTACCAGGACTTATTGATTATAAAAAAGCATATGAAATTTGGAAAATTGATAAACTTGATTTTCTTGCATGTGCTGGAGCATTCTTTGGAGTATTGTTTTCATCTGTCGAAATAGGCCTTGCAATTGGTGTCTTCATATCATTTGCGAAGATAATTTTGATATCGATTCAACCTGGTGTAGCGGTTATTGGAAGGTTTCCAGGAACCGATGCATTTGGTGATGTAGAACAATATCCGATGGTGATTAACATGCCCGGAGTTATGGTTGTTAGTATAAAATCTGCATGGTTTTGCTTTGCAAATGCAAGTCCTATAAGGGAAAGGATTGAGAGATGGGTGACTGAAGAAAAAGGTGAAAATGGTAAAGGAGAAAGTACCATCAAATTTGTCATTATTGATGCATCAAGTCTTGTGAGTATTGACACAGCAGGGATAGCTTCTCTGGTGGAGCTGAATAATAATCTTATGTTACATGGAGTCACGTTATCCATTGCTAACCCGAGATGGCAAGTGATTCACAAACTAAGATTGGCTAACTTTATAACAGAAATTGGAGGAAGGGTTTTTCTGTCTGTGGGAGAAGCTATTGATGCAATACTTAGTGCCAAAATGGCTTCCGTATAA 2004 0.3802 MSPSTLSLPPLEVLMDLENENNGRETRKLWVLNPPEPPCMLHRVADNIKDSVLHCPNPNRFFSLKHQPLDKTVLPLLHGLFPILKSLKNYDVDKFKCDVLAGLILAIFAIPQAMGNASLAKMSPEYGLYTSVVPPIIYALLASSREIVIGPVTVDSLLLSSMIQTLKDPVNDSVAYTQLVLTATFFTGIFQVAFGFLRFGFLVDYLSHATIIGFLAAVAIGIVLQQLKALFGITNFTNKTDLISVIKSLWTSYINQSEWHPYNFIIGFSFLSFIIFTRLLGKRKKKFLWLSHMAPLVSFIISTVIAYRVNVHQPKLEDYKIEVLGPIKGGSLNPSSLNQLQLDSNGEYLGPLIKIALTVAIISTTESIAVARIYASLRGYNIDPNREVLSLGIMNIFGSFTSCYVASGSIARTAVNYNAGSQTTVSSIVMALTVLTSLKFLTKLLYFTPKAMLAAIILSAVPGLIDYKKAYEIWKIDKLDFLACAGAFFGVLFSSVEIGLAIGVFISFAKIILISIQPGVAVIGRFPGTDAFGDVEQYPMVINMPGVMVVSIKSAWFCFANASPIRERIERWVTEEKGENGKGESTIKFVIIDASSLVSIDTAGIASLVELNNNLMLHGVTLSIANPRWQVIHKLRLANFITEIGGRVFLSVGEAIDAILSAKMASV 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03134 667 CDD STAS_SulP_like_sulfate_transporter 538 650 - -
Vivi3g03134 667 Gene3D STAS domain 517 662 IPR036513 -
Vivi3g03134 667 NCBIfam sulfate permease 82 651 IPR001902 GO:0016020|GO:0055085
Vivi3g03134 667 SUPERFAMILY SpoIIaa-like 543 659 IPR036513 -
Vivi3g03134 667 Pfam Sulfate permease family 95 485 IPR011547 GO:0016020
Vivi3g03134 667 Pfam STAS domain 538 655 IPR002645 -
Vivi3g03134 667 ProSiteProfiles STAS domain profile. 559 659 IPR002645 -
Vivi3g03134 667 ProSitePatterns SLC26A transporters signature. 124 145 IPR018045 GO:0008271|GO:0008272
Vivi3g03134 667 PANTHER SULFATE TRANSPORTER 71 660 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03134 Vivi-Chr3 53200441 53203555 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03134 27 664 Inorganic Solute Cotransporters AT5G10180 52.886 0.0 683
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03134 K17469 - gmx:100817841 889.412