Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03133 ATGACATCTTCAACAGTCGATACCTGCAAATCCGAGGATTTGCAGGTTGACATTGAGAAGAACTTGCCACAGGATGTAAGGTCTCAGTGGATTCTTAATGCTCCTGAGCCTCCAAGTCCTTGGCATGTAGCTGCAGATTCTGTGAGGAAAACAGTTTCTAATTTTAGAGGCAAAGTTTCCTCTCTAAGTGATCGATCTTGCGGTACAGTCCTACTTTCAGCTTTGCAGGTTGTTTTTCCTATTCTTGTTTGGGGCAGAAGCTACACTGCTGCTAAGTTTAGGAAGGATTTTCTTGCTGGACTCACTATTGCTAGCCTATGTATTCCACAGAGCATAGGATATGCAACATTAGCAAACCTTGCTCCTCAATATGGACTTTATACGAGTGTTGTTCCGCCGCTGATCTACTCTGTAATGGGAACTTCGCGAGAGATAGCAATTGGTCCTGTGGCAGTGGTTTCGCTGTTGTTATCATCAATGGTACAGAAGCTAGTAGATCCTTCTACTGATCCAGTTGGTTACACAAAGCTTATTTTTCTTACAACTCTCTTTGCTGGTATCTTTCAAACTTCATTTGGACTATTCAGGTTGGGTTTCCTTGTGGATTTTCTGTCACATGCTGCAATTGTTGGATTTGTAGCAGGAGCTGCAATTGTGATTGGGCTTCAACAGTTGAAGGGACTGTTTGGAATCACTCATTTTACAACCAAAACAGACATAATCTCTGTCTTGAAAGCTGTTTGGGAAGCATTTCATAATCCTTGGAACCCTCATAATTTTATCCTGGGAGGATGTTTCTTGGCGTTTATCCTAACAACTAGATTTCTGGGTAAAAGGAAGAAGAATCTGTTCTGGTTGGCATCAATTGCACCACTTGTATCTATTGTACTCTCAACTCTAGTTGTTTATCTAACTCGAGCGGATAAAAATGGCGTAAAAATTGTGAAACATGTCAAAGGAGGACTCAATCCAATCTCCATCAATCAGTTAGACTTTAACAGTCCACATGTTGTTGATGTTGCCAAAATTGGACTCGTTGTCGCTGTTGTTGCTCTTACCGAATCTGTTGCTGTTGGACGATCTTTTGCGTCAATCAAAGGATACCAGCTCGACGGAAACAAAGAGATGATGTCAATAGGCTTCACAAACATCATAGGATCTCTCACCTCATGTTATGTTGCAACTGGTTCATTCTCTCGAACCGCGGTTAATTACGCTGCTGGATGTGAAAGTTTAATATCAAACATTGTGATGGCAGTTACAGTGATGATATCACTGCAGTTTTTGACAAATCTATTGTATTATACACCAATTGCTATCATTGCATCAGTGATCCTCTCTGCTCTACCAGGACTCATAGACATAACTGAAGCATACAAAATTTGGAAAGTTGATAAACTTGACTTTCTTGCTTGCATTGGAGCCTTCTTTGGTGTACTCTTTGCTTCCGTCGAGATTGGTCTTCTAGTCGCGGTGGTAATATCTTTTACAAAGATAATTCTGATATCGATTCGACCAAGCACAGAAACTTTAGGAAAACTTCCAGGAACTGATTTATTCTGTGATGTTGATCAGTATCCTATGGCAATTCAGATTCCTGGTGTTATCATAATACGTATGAAATCCGCGTTGCTTTGTTTCGCGAATGCCAACTTCGTTAAAGAAAGAATCATCAAATGGGTTACTCCGAAAGAATCAGAAGATGACAAGGGAAATTCAAAGAGTACAATTCAACTCGTAATTCTTGACACCTCGAATTTGGTGAATATTGACACTTCTGGAATTGCTTCTTTGGAGGAACTGTACAAGAATTTGTCTTCACATGGGAAACAGTTGGCGATTGTGAATCCGAGGTGGCAAGTTATACACAAGCTGAAGGTGTCGAAGTTTATCGACAAAATAGGTGGGAGAGTTTATCTGACTGTTGAAGAAGCTGTTGTTGCAGGATGCAAGAGTAACCAGTTCTGA 1968 0.4055 MTSSTVDTCKSEDLQVDIEKNLPQDVRSQWILNAPEPPSPWHVAADSVRKTVSNFRGKVSSLSDRSCGTVLLSALQVVFPILVWGRSYTAAKFRKDFLAGLTIASLCIPQSIGYATLANLAPQYGLYTSVVPPLIYSVMGTSREIAIGPVAVVSLLLSSMVQKLVDPSTDPVGYTKLIFLTTLFAGIFQTSFGLFRLGFLVDFLSHAAIVGFVAGAAIVIGLQQLKGLFGITHFTTKTDIISVLKAVWEAFHNPWNPHNFILGGCFLAFILTTRFLGKRKKNLFWLASIAPLVSIVLSTLVVYLTRADKNGVKIVKHVKGGLNPISINQLDFNSPHVVDVAKIGLVVAVVALTESVAVGRSFASIKGYQLDGNKEMMSIGFTNIIGSLTSCYVATGSFSRTAVNYAAGCESLISNIVMAVTVMISLQFLTNLLYYTPIAIIASVILSALPGLIDITEAYKIWKVDKLDFLACIGAFFGVLFASVEIGLLVAVVISFTKIILISIRPSTETLGKLPGTDLFCDVDQYPMAIQIPGVIIIRMKSALLCFANANFVKERIIKWVTPKESEDDKGNSKSTIQLVILDTSNLVNIDTSGIASLEELYKNLSSHGKQLAIVNPRWQVIHKLKVSKFIDKIGGRVYLTVEEAVVAGCKSNQF 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03133 655 Pfam STAS domain 526 645 IPR002645 -
Vivi3g03133 655 SUPERFAMILY SpoIIaa-like 530 646 IPR036513 -
Vivi3g03133 655 PANTHER SULFATE TRANSPORTER 61 651 IPR001902 GO:0016020|GO:0055085
Vivi3g03133 655 Pfam Sulfate permease family 93 473 IPR011547 GO:0016020
Vivi3g03133 655 NCBIfam sulfate permease 80 637 IPR001902 GO:0016020|GO:0055085
Vivi3g03133 655 CDD STAS_SulP_like_sulfate_transporter 526 635 - -
Vivi3g03133 655 ProSitePatterns SLC26A transporters signature. 122 143 IPR018045 GO:0008271|GO:0008272
Vivi3g03133 655 ProSiteProfiles STAS domain profile. 545 649 IPR002645 -
Vivi3g03133 655 Gene3D STAS domain 505 651 IPR036513 -
Vivi3g03133 655 FunFam Sulfate transporter 31 505 652 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03133 Vivi-Chr3 53156316 53160902 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03133 24 648 Inorganic Solute Cotransporters AT5G10180 67.732 0.0 880
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03133 K17469 - gmx:100817831 1076.23