Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03126 ATGTATATTGATACTCACTTTGAAGGACCTTCCCTTTTTCCCAATGATTCTCCTGATAAGGAGTTTACTGAAGAAATTCTATCTTACACAGATACCTTTTACAAGACAGTTGTTTCTTCTTTTAAAGGAGATGTGAATGAGGCTGATACTGCTTTTGATTACATTGAGAATGTTCTCTCCAAGTATGATAATGGACCTTTCTTCCTTGGCCAATTTAGTTTGGTGGATATAGCATATGCTCCTTTTATGGAAAGATTTCAACCTTTTCTAGTGGAAGTGAAAAATTATGACATTACATTGGGCAGACCTAAATTGGCGGCATGGATTGAGGTAGATCATGCAGTAAAATCTTATTTATTTAATATTTTGGTGAATTGA 378 0.3439 MYIDTHFEGPSLFPNDSPDKEFTEEILSYTDTFYKTVVSSFKGDVNEADTAFDYIENVLSKYDNGPFFLGQFSLVDIAYAPFMERFQPFLVEVKNYDITLGRPKLAAWIEVDHAVKSYLFNILVN 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03126 125 PANTHER GLUTATHIONE S-TRANSFERASE L1 2 116 IPR044629 GO:0004364
Vivi3g03126 125 Pfam Glutathione S-transferase, C-terminal domain 22 110 IPR041695 -
Vivi3g03126 125 SUPERFAMILY GST C-terminal domain-like 7 114 IPR036282 -
Vivi3g03126 125 Gene3D - 9 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03126 Vivi-Chr3 53035788 53036523 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03126 2 118 Glutathione S-transferase Gene Family AT5G02780 60.504 7.24e-45 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03126 K00799 - vvo:131658054 259.225