Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03097 ATGGCTGAGGAGTCACAGAAGAAGGTTGTGTTTGACAGAGAAGCCGCGAAGCAGGTTGTGTTTGACGGAGAAGCTGCGTCGTCGCTGGTGAAGGAGCTGAGGGTGAGTTTCAGTTCCGGTAAGACGCGGAGTTACGAATGGAGAATATCTCAGGTGAAGGCTCTTTTGAAAATGATGGCCGAACAAGAGGATCAAATCGTTGACGCTCTTCGTTCTGACCTTGCTAAACCGCCACTTGAAACGGTCGTCTACGAGATTGGTATGTTTAAAAACTCGTGTGAACTCGTGTTGAAGGAATTGAAACAATGGATGACACCAGAAAAGGCTAAAACTTCAATCACAACTTTTCCTTCTTCGGCTGAAATCATACCTGAACCACTTGGGGTTGTGTTAGTTATCTCCGCGTGGAACTATCCATTTTTGCTGTCCCTTGATCCAGTCGTTGGGGCTATAGCCGCTGGTAATGCTGTGGTTCTAAAACCATCCGAAATTGCTCCAGCTTCGTCTTCACTGCTGGCGAAATTGTTAGGGGAGTACTTGGATAACTCGTCTATAAGAGTTGTAGAAGGGGCGGTGGATGAAACTACTGCATTGCTGCAACAAAAGTGGGACAAAATTTTCTATACAGGAAATGGAAAAGTGGGACGGATAGTGATGGCTGCTGCTGCAAAACACCTTACACCAGTTGTTCTTGAGCTTGGAGGAAAGTCTCCAACTGTTGTTGATTCAAATGTCAATTTAGAGGTTGCTGCAAGACGGATAATTTCTGGCAAATGGGGCTGTAACAATGGACAAGCCTGCATTTCTCCTGATTATCTTATAACAACAAAAGAATTTGCTCCGAAATTGGTAGAAGCTTTAAAGACTGAATTGGAAAACTGCTTTGGAAAGAGCCCGATAGAATCGAAAGATTTGTCGCGCATTGTGAACTCTAACCACTTTGCTCGCTTGATAAAGTTCTTGGACGACGATAAGGTTTCTGACAAGATTGTTTATGGAGGTGAAAAGGATGAAAGCAAATTGAGGATTGCTCCAACTATTTTATTAGACGTTCCGCAAGATTCTCTGATAATGAGTGAGGAAATCTTTGGTCCATTGCTTCCGATAGTCACGGTGAATAAGCTGGAAGAAAGCTTCGATTTGATCAACGCGGGAACAAAGCCACTTGCTGCATATTTATTTACAAACGACAACAAGTTCAAGGAGCAATTTGTGAAGAATGTTTCTGCTGGAGGCTTGCTTATCAATGACACTGTCTTACATCTTGTGGTTCATACATTGCCATTTGGGGGAGTTGGTGACAGTGGAATGGGTGCATACCATGGAAAATTCTCCTTTGATGCTTTTACTCACAGAAAGGCAGTTCTATATCGCGGGTTTACAGGCGATTCATCGATAAGGTACCCACCTTACACTGATACTAAGCAAAAAATGATGAAGGCTCTAGTCGCTGGTGATGTTCCTGGTGTAGTTCGTGCGCTTATTGGATGGTCTTAA 1497 0.4355 MAEESQKKVVFDREAAKQVVFDGEAASSLVKELRVSFSSGKTRSYEWRISQVKALLKMMAEQEDQIVDALRSDLAKPPLETVVYEIGMFKNSCELVLKELKQWMTPEKAKTSITTFPSSAEIIPEPLGVVLVISAWNYPFLLSLDPVVGAIAAGNAVVLKPSEIAPASSSLLAKLLGEYLDNSSIRVVEGAVDETTALLQQKWDKIFYTGNGKVGRIVMAAAAKHLTPVVLELGGKSPTVVDSNVNLEVAARRIISGKWGCNNGQACISPDYLITTKEFAPKLVEALKTELENCFGKSPIESKDLSRIVNSNHFARLIKFLDDDKVSDKIVYGGEKDESKLRIAPTILLDVPQDSLIMSEEIFGPLLPIVTVNKLEESFDLINAGTKPLAAYLFTNDNKFKEQFVKNVSAGGLLINDTVLHLVVHTLPFGGVGDSGMGAYHGKFSFDAFTHRKAVLYRGFTGDSSIRYPPYTDTKQKMMKALVAGDVPGVVRALIGWS 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03097 498 CDD ALDH_F3FHI 26 457 - -
Vivi3g03097 498 Pfam Aldehyde dehydrogenase family 28 455 IPR015590 GO:0016491
Vivi3g03097 498 PANTHER ALDEHYDE DEHYDROGENASE 25 487 IPR012394 GO:0006081
Vivi3g03097 498 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 231 238 IPR029510 GO:0016491
Vivi3g03097 498 SUPERFAMILY ALDH-like 29 463 IPR016161 GO:0016491
Vivi3g03097 498 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 235 435 IPR016163 GO:0016620
Vivi3g03097 498 FunFam Aldehyde dehydrogenase 235 435 - -
Vivi3g03097 498 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 35 453 IPR016162 GO:0016491
Vivi3g03097 498 FunFam Aldehyde dehydrogenase 34 238 - -
Vivi3g03097 498 PIRSF ALDH 5 492 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03097 Vivi-Chr3 52492687 52495661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03097 86 496 Aldehyde Dehydrogenase Gene Family AT1G44170 71.776 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03097 K00128 - gmx:100783726 801.201