Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03094 ATGGAAGCTAGCAAACTCGGATTTGGCGTTGTGATTGAAAGGTCCGACAATGGCACTAGTAGAAGGCAAGCATGTGTAATGATGATTTGTGAGAAAGGTGTAAAATATGTTTCAAGAGTTCGACAGTTAAAACATGTTGACACCGGATCGAAAAAATGTGAGTGTTTGTTTAAATTGCGCGGATCATGTAGGGTGGATGATACATGGCGGTTTAATGTCGTTTGTGGTGAACATAATCATGCGCTGGACAGCAAGCTACAAGATTTGAAACGGAAGAGACCACAAAATGTGTCAAATATCAAGCAGGTATACAACGAGCATTTTAGAGGGAACATTGCGAGCAGAGGTTCGAGATCCGAAATACAAGAACTTTTGAAACTTTTGGACGATAACCACTATGTTTCAAGAAGACATTTTTCGGTTGGATTTGCATTTCTCAAATGTGAGAAAGAAGGCAATGTTACATGGGCGTTGGATATATGCAAGAGTTTGTTGAAGGATCCACAAAATATGCCTAGTGTCATTGTAAGCGACCGAGATAAAGCCCTTATGAATGCGGTTGGTAGTGTGTTTCCTACATTCTATGCAGTACTCTGTTGA 600 0.4033 MEASKLGFGVVIERSDNGTSRRQACVMMICEKGVKYVSRVRQLKHVDTGSKKCECLFKLRGSCRVDDTWRFNVVCGEHNHALDSKLQDLKRKRPQNVSNIKQVYNEHFRGNIASRGSRSEIQELLKLLDDNHYVSRRHFSVGFAFLKCEKEGNVTWALDICKSLLKDPQNMPSVIVSDRDKALMNAVGSVFPTFYAVLC 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03094 199 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 3 199 IPR031052 GO:0006355
Vivi3g03094 199 Pfam MULE transposase domain 135 199 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03094 Vivi-Chr3 52438208 52439066 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi3g03094 MULE 2.6e-09 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03094 - - vvo:131658045 409.453