Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03093 ATGGCAGAACGTGTGTTACTCACTCCTTCACTCCCTTTACCATCATCTCGACCTTCATTTTCACCAACCGCAATGGCTACTATTAGTGGCGGCGCCGCCGCTCGTATCATCCCCTCCGCTACCAGAGCCACCGTCTCACTCTCCTATTCTTCCCGTTCCTTTTTCTCATTTTCATCCTCTTCTACTTCCGCTTCCTCGCTCAAATGCTTGCGCTCCTCGCCTCGCATTTCTCACCTATTTCTCGACCAGCGAAGAGCAGAGGTTCGTGTTTCGAGTGGACGATTCGGAACGGTTTCGGCCTTGGCGTCTGATCCTGATCAGTTGAAGAGCGCTAGAGAAGATATCAAGGAGCTTCTCAGCACTAAATTCTGTCATCCTCTTCTGATTCGTTTGGGATGGCATGATGCTGGTACTTATAATAAGAATATCGAGGAGTGGCCACAGAGAGGTGGAGCCAATGCTAGCGTAAGATTTGAAGTTGAGTTGAAACATGGAGCCAATGCTGGACTTGTAAATGCATTGAAACTTCTCCAGCCGATCAAAGACAAGTATTCAGGCGTGACATATGCAGACTTATTTCAGTTAGCTGGTGCTACAGCTGTGGAGGAAGCAGGAGGCCCAAAAATTCCCATGAAATATGGAAGAGTAGATACCTCTGGACCTGACCAATGCCCTGAAGAAGGACGGCTTCCTGATGCAGGCCCCCCTTCACCTGCTGATCATTTGCGTGAAGTTTTTTACCGAATGGGATTGAACGACAAGGAAATTGTTGCATTATCTGGTGCGCACACACTGGGGCGGTCTAGACCAGACCGTAGTGGCTGGGGAAAACCTGAGACTAAATACACGAAAGACGGGCCAGGAGCACCTGGAGGACAATCCTGGACCGCACAATGGTTAAAGTTTGACAATTCTTACTTTAAGGACATCAAAGAAAAAAGGGATGAAGATCTATTGGTATTGCCAACTGATGCAGCTCTTTTTGAAGATCCTTCCTTCAAGGTGTATGCTGAGAAATATGCTGAAGATCAGGAAGCATTCTTTAAAGATTATGCTGAAGCACATGCCAAACTCAGCAACCTTGGAGCCAAATTTGATCCTCCAGAGGGAATTGTGATAGACGGTTCTCCAAATGTTAAGGGAGAGAAGTTTGTAGCAGCCAAGTACTCCTCTGGAAAGGAGTAA 1185 0.4717 MAERVLLTPSLPLPSSRPSFSPTAMATISGGAAARIIPSATRATVSLSYSSRSFFSFSSSSTSASSLKCLRSSPRISHLFLDQRRAEVRVSSGRFGTVSALASDPDQLKSAREDIKELLSTKFCHPLLIRLGWHDAGTYNKNIEEWPQRGGANASVRFEVELKHGANAGLVNALKLLQPIKDKYSGVTYADLFQLAGATAVEEAGGPKIPMKYGRVDTSGPDQCPEEGRLPDAGPPSPADHLREVFYRMGLNDKEIVALSGAHTLGRSRPDRSGWGKPETKYTKDGPGAPGGQSWTAQWLKFDNSYFKDIKEKRDEDLLVLPTDAALFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPEGIVIDGSPNVKGEKFVAAKYSSGKE 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03093 394 Gene3D Peroxidase, domain 2 233 356 - -
Vivi3g03093 394 PRINTS Plant ascorbate peroxidase signature 125 140 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vivi3g03093 394 PRINTS Plant ascorbate peroxidase signature 186 204 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vivi3g03093 394 PRINTS Plant ascorbate peroxidase signature 104 124 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vivi3g03093 394 PRINTS Plant ascorbate peroxidase signature 324 348 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vivi3g03093 394 PRINTS Plant ascorbate peroxidase signature 205 217 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vivi3g03093 394 MobiDBLite consensus disorder prediction 262 293 - -
Vivi3g03093 394 MobiDBLite consensus disorder prediction 218 239 - -
Vivi3g03093 394 ProSiteProfiles Plant heme peroxidase family profile. 128 382 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi3g03093 394 FunFam L-ascorbate peroxidase S chloroplastic/mitochondrial 111 235 - -
Vivi3g03093 394 SUPERFAMILY Heme-dependent peroxidases 105 364 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vivi3g03093 394 PRINTS Haem peroxidase superfamily signature 205 217 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi3g03093 394 PRINTS Haem peroxidase superfamily signature 295 310 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi3g03093 394 PRINTS Haem peroxidase superfamily signature 187 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi3g03093 394 PRINTS Haem peroxidase superfamily signature 125 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi3g03093 394 PRINTS Haem peroxidase superfamily signature 255 270 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi3g03093 394 Gene3D - 111 364 - -
Vivi3g03093 394 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 97 365 IPR044831 GO:0004601|GO:0034599
Vivi3g03093 394 ProSitePatterns Peroxidases proximal heme-ligand signature. 255 265 IPR019793 -
Vivi3g03093 394 CDD ascorbate_peroxidase 97 366 - -
Vivi3g03093 394 Pfam Peroxidase 112 343 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi3g03093 394 FunFam L-ascorbate peroxidase T, chloroplastic 233 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03093 Vivi-Chr3 52430564 52437129 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03093 187 361 Peroxidase AT2G22420 32.990 8.92e-19 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03093 K00434 - gmx:100784258 652.129