Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03073 ATGTCCAATCGTCGTTCATCGTTTTCTTCCTCAACGACATCATCTATGGCAAAACGACACCCTCCGGTTACCACCGCCGAGAACCACGCCGGAAAAGTTTTAGCCTCCGCCAAGAAACGTCCTCCTCTCACAAACCTCACCAATCACAACGCTTCCCGTAACTCATCATCTCTGGTGACTAAAGTTGCAAAGACCAAGAAAGAACCTTCGCCATGCACCTCTTCGATTTCCGGCAACAAAAAACCTACTTTTTCCAATGTTAAATCAGCTACGGTTGTTTTTCCGAAGGCTATTACTACTACTAGTACTAGTACTTCCACTTCCAGTTCTTTTTCCGAAACTGTTCTTCCAATAGTTCCTACTACTTTCAATGTTCCGGTTTCGAGTGCAATGGATTTATCGTCCCCCGGAAAATCAGACGGAATGTCGGTTTCCATGGACGAGACAATGTCGTCTTGTGATTCTTTCAAGAGTCCTGATATTGAGTATGTGGATAACAGTGATGTTGCTGCGGTTGATTCGATTGAGAGGAAGACTTATTGTAGTCTTAACATTTCTGATACTGATTATCCAAAAGGTAATATTTGTAGTAGAGACATTCTTGTTGAGTTGGAAAAGGGGGAGAAAATTGTTGATATTGATGATGATCATGTGGATCCTCAGCTTTGTGCTTCTTTTGCTTGTGACATCTACAAGCATTTGCGTGCTTCTGAGGCAAAGAAAAGACCATCCACAAACTTCATGGAGAAGATTCAGAAGGATATAAATCCCAGCATGCGTGCTATATTGATTGACTGGCTAGTGGAGGTGGCTGAAGAGTATAGACTTGTACCAGATACATTGTATTTGACAGTAAACTACATTGATCGGTATCTATCTGGGAATGCCATGAACAGGCAACAATTACAATTACTTGGAGTTGCTTCTATGATGATTGCATCTAAATATGAGGAGATTTGTGCACCTCAGGTGGAGGAATTTTGTTACATAACTGACAACACATACTTCAAGGAAGAGGTTTTGCAGATGGAATCTACTGTCTTGAATTTTTTGAAATTTGAAATGACTGCCCCAACAATTAAATGCTTTCTGAGAAGATTTGTACGTGCAGCTCAAGGAATTGATGAGGTCCCTTCACTGCAACTAGAGTGTTTGACAAACTACATTGCCGAATTATCCCTGTTGGAGTACAGTATGCTTAGTTATGCTCCATCACTTATAGCAGCATCTTCAATTTTCCTGGCAAAATTTATGCTATTCCCTTCGACGAAACCATGGAATCCAACATTGCAGCATTACACTCAATACCAGACATCTGATTTGTGTGCTTGTGTAAAAGATCTCCATCGTCTTTGTTGCAACAGCCCTAATTCTAACTTGCCTGCAATTAAGGAGAAATACAATCAGCACAAGTACAAGTATGTGGCCAAGAAGCACTGCCCTTCATCAATACCTCAAGAGTTTTTCCAGAATTGA 1476 0.4092 MSNRRSSFSSSTTSSMAKRHPPVTTAENHAGKVLASAKKRPPLTNLTNHNASRNSSSLVTKVAKTKKEPSPCTSSISGNKKPTFSNVKSATVVFPKAITTTSTSTSTSSSFSETVLPIVPTTFNVPVSSAMDLSSPGKSDGMSVSMDETMSSCDSFKSPDIEYVDNSDVAAVDSIERKTYCSLNISDTDYPKGNICSRDILVELEKGEKIVDIDDDHVDPQLCASFACDIYKHLRASEAKKRPSTNFMEKIQKDINPSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNAMNRQQLQLLGVASMMIASKYEEICAPQVEEFCYITDNTYFKEEVLQMESTVLNFLKFEMTAPTIKCFLRRFVRAAQGIDEVPSLQLECLTNYIAELSLLEYSMLSYAPSLIAASSIFLAKFMLFPSTKPWNPTLQHYTQYQTSDLCACVKDLHRLCCNSPNSNLPAIKEKYNQHKYKYVAKKHCPSSIPQEFFQN 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03073 491 Pfam Cyclin, N-terminal domain 229 355 IPR006671 -
Vivi3g03073 491 MobiDBLite consensus disorder prediction 41 77 - -
Vivi3g03073 491 FunFam Mitotic cyclin 6 243 343 - -
Vivi3g03073 491 PANTHER CYCLINS 158 469 IPR039361 -
Vivi3g03073 491 SMART Cyclin_C_2 358 481 IPR004367 -
Vivi3g03073 491 FunFam Cyclin A1 345 477 - -
Vivi3g03073 491 SUPERFAMILY Cyclin-like 219 355 IPR036915 -
Vivi3g03073 491 SMART cyclin_7 362 450 IPR013763 -
Vivi3g03073 491 SMART cyclin_7 265 349 IPR013763 -
Vivi3g03073 491 Gene3D - 243 356 - -
Vivi3g03073 491 CDD CYCLIN_AtCycA-like_rpt2 358 472 - -
Vivi3g03073 491 MobiDBLite consensus disorder prediction 1 21 - -
Vivi3g03073 491 SUPERFAMILY Cyclin-like 358 483 IPR036915 -
Vivi3g03073 491 Gene3D - 229 477 - -
Vivi3g03073 491 MobiDBLite consensus disorder prediction 1 77 - -
Vivi3g03073 491 CDD CYCLIN_AtCycA_like_rpt1 220 354 - -
Vivi3g03073 491 PIRSF Cyclin_A_B_D_E 6 489 IPR046965 GO:0016538|GO:0044772
Vivi3g03073 491 ProSitePatterns Cyclins signature. 260 291 IPR006671 -
Vivi3g03073 491 Pfam Cyclin, C-terminal domain 358 479 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03073 Vivi-Chr3 52078884 52081844 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03073 1 491 Core Cell Cycle Gene Families AT1G44110 59.639 0.0 564
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03073 K06627 - gmx:100789565 705.286