Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03047 ATGCAGTTATATCATCATCCATTTGATTTGGATAGCCAGAAGGTGAGACTTGCATTAGAAGAAAAGGGCATTGATTATACATCTTTCCATGCCAATCCTGTAACTGGCAAGAACTTGGATTCGACGCTCTTCCAGATGAATCCCAGCGGAAGCCTCCCTGTTTTTCAAAATGGATCTCATATCATTTACAAGACTATTGATATTATTCAGTACATAGAAAGAATTGCTGTGGTCTCTGCAGGGTCTGAGGATATCAGTAGTAATAGGAAGGAAGTGATTGAATGGATGCAGAAGATACAAGAATGGAATCCTAAATATTTTACCCTTTCGCATATACCGGACAAACATCTAGTTTATGTTTCCAAGTTCATAAGGCGTGTGGTGATAGCTCGTATGTCGGAGTCCCCTGAATTAGCAGGTGCTTACCATAGGAAGTTAAGGGAAGCCTATCAAACCGATGAAAAACTGAAAGACCCTGATGTTTTGAGAAGGAGTAAGGAGCATTTGGTTAGACTGCTTGATGAAGCCGAAAGACAACTGAGTGAAACCCCATATTTGGCTGGCGAAGAATTTACCATGGCCGATGTGATGCTCATTCCGATTTTGGCTCGTTTAAAACTCTTGGATTTAGAGAATGAGTACATAACTGGGAGGCCAAACATTGCTGAGTATTGGATTTTGGTTCAGCAAAGGCCTAGTTATAAAAAGGTGATTGGTAAGCATTTTGATGGTTGGAGAAAGCACAAAACATTGTTCAAAACTTGGTGCTTTGTTCGTATTAGAAGTTTGCTTAAGAGGTACTAG 804 0.4017 MQLYHHPFDLDSQKVRLALEEKGIDYTSFHANPVTGKNLDSTLFQMNPSGSLPVFQNGSHIIYKTIDIIQYIERIAVVSAGSEDISSNRKEVIEWMQKIQEWNPKYFTLSHIPDKHLVYVSKFIRRVVIARMSESPELAGAYHRKLREAYQTDEKLKDPDVLRRSKEHLVRLLDEAERQLSETPYLAGEEFTMADVMLIPILARLKLLDLENEYITGRPNIAEYWILVQQRPSYKKVIGKHFDGWRKHKTLFKTWCFVRIRSLLKRY 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03047 267 Pfam Glutathione S-transferase, C-terminal domain 161 224 - -
Vivi3g03047 267 CDD GST_N_family 1 73 - -
Vivi3g03047 267 Gene3D Glutaredoxin 1 102 - -
Vivi3g03047 267 SUPERFAMILY Thioredoxin-like 1 74 IPR036249 -
Vivi3g03047 267 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 80 IPR004045 -
Vivi3g03047 267 PANTHER GLUTATHIONE S-TRANSFERASE TCHQD 1 267 IPR044617 GO:0004364
Vivi3g03047 267 Gene3D - 129 238 - -
Vivi3g03047 267 SUPERFAMILY GST C-terminal domain-like 145 240 IPR036282 -
Vivi3g03047 267 CDD GST_C_family 147 225 - -
Vivi3g03047 267 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 106 252 IPR010987 -
Vivi3g03047 267 Pfam Glutathione S-transferase, N-terminal domain 1 74 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03047 Vivi-Chr3 51617201 51619300 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03047 1 267 Glutathione S-transferase Gene Family AT1G77290 70.037 2.13e-144 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03047 K22077 - gmx:100792543 480.33