Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03035 ATGGGTTTGAGGAAGGTTGCTTGTATTGGTGCATGGCATCCTGCCATAGTTTCCTCCACTGTTGCAAGGGCTGGTCAAAACGGTTACCACCACTGTACTGAGCTGGACAAGAAGATTTACAACCTCGGCAAATATGGAGAAGATACCTACGATGCCCAAACTGAGACCGAGAAAGACATCAATCCCATGGGTGGTTTCCCTCACTCCAATTTCTTTGAGAAGCAGGTTCCTATTGATGCTGATTTCCATAAGGATGAAGTGATTGACATCATTGGAGTGACAAAAGGTAAGAGTTATGAATATGTTACTCCTTGA 315 0.4413 MGLRKVACIGAWHPAIVSSTVARAGQNGYHHCTELDKKIYNLGKYGEDTYDAQTETEKDINPMGGFPHSNFFEKQVPIDADFHKDEVIDIIGVTKGKSYEYVTP 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03035 104 SUPERFAMILY Translation proteins 2 74 IPR009000 -
Vivi3g03035 104 Gene3D Translation factors 29 68 - -
Vivi3g03035 104 Gene3D Translation factors 78 95 - -
Vivi3g03035 104 PANTHER 60S RIBOSOMAL PROTEIN L3-RELATED 2 69 IPR045077 GO:0003735|GO:0005840|GO:0006412
Vivi3g03035 104 Gene3D Ribosomal protein L3, domain 3 2 28 IPR044892 -
Vivi3g03035 104 Pfam Ribosomal protein L3 70 102 IPR000597 GO:0003735|GO:0005840|GO:0006412
Vivi3g03035 104 Pfam Ribosomal protein L3 2 68 IPR000597 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03035 Vivi-Chr3 51418314 51421349 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g03035 2 68 Cytoplasmic Ribosomal Protein Gene Family AT1G61580 74.286 1.22e-31 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03035 K02925 - vvo:131661390 223.402