Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g03024 ATGCCGCCGCGTCGCTGCACGGTTTACGCCGATAGCGATTACGACGACGATGACGACGATAACCTCACGTCGAGGATTATACGGTGTCTCTCTTGCGACGAGAATTACGAGCCCGACGATGCCGGTACCTGCAAAGAATGCTACGAAGAAGCGAACGAAACCGAGGAGGAACTCAAACGTCAGATCCAAGACCTCAAATCCAAAGTCTCGTTCCTTACTCTCTCTTCTCCGCTTGATTCTCCTTCCACGACTGATCTCGTTCTTCTTCCGTCTGGTGATGCTTTCTCTCCTTCCATTCCTGCTCACAAGGCCGTTCTCGTTAGTCGCTCTCCAGTCTTCAGAGCCATGCTTGAACACGATATGGATGAAAGCCGGAGTGGCACCATCAAGATTGCTGACGTATCATACGACGCCCTTCGTGCTTTCGTTAACTACTTATACACTGCTGAAGCATTCCTTGACAACCAAATGGCATGTAACCTTTTAGTTTTAGCCGAAAAATATCAGGTGAAGCATCTTAAAGCATACTGTGAGAAATATTTGATCTCCAAACTGAATTGGGAGAAAGCTGTTGTGAACTTTGCCTTTGCACATCAACACAATGCCAACCAATTGCAAGATGCAGCCTTGGCAGTGATCATGGAGAACATGGACAACCTCACTAAAAATGAAGATTATATAGAATTAGTGGACAGTAATCCTCGTCTTGTTGTGGAAATATATGAAGCATATCTTGGCAAACAGGTTAATACTGCAGCCACACACGCTATAGGAACACGCGATGTAGGAAAATAG 795 0.4591 MPPRRCTVYADSDYDDDDDDNLTSRIIRCLSCDENYEPDDAGTCKECYEEANETEEELKRQIQDLKSKVSFLTLSSPLDSPSTTDLVLLPSGDAFSPSIPAHKAVLVSRSPVFRAMLEHDMDESRSGTIKIADVSYDALRAFVNYLYTAEAFLDNQMACNLLVLAEKYQVKHLKAYCEKYLISKLNWEKAVVNFAFAHQHNANQLQDAALAVIMENMDNLTKNEDYIELVDSNPRLVVEIYEAYLGKQVNTAATHAIGTRDVGK 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g03024 264 Pfam BTB/POZ domain 78 184 IPR000210 GO:0005515
Vivi3g03024 264 ProSiteProfiles BTB domain profile. 84 155 IPR000210 GO:0005515
Vivi3g03024 264 SMART BTB_4 84 185 IPR000210 GO:0005515
Vivi3g03024 264 SUPERFAMILY POZ domain 75 183 IPR011333 -
Vivi3g03024 264 Gene3D Potassium Channel Kv1.1; Chain A 51 186 IPR011333 -
Vivi3g03024 264 Gene3D - 187 256 - -
Vivi3g03024 264 FunFam BTB/POZ domain-containing protein 187 259 - -
Vivi3g03024 264 PANTHER SPECKLE-TYPE POZ PROTEIN 43 251 - -
Vivi3g03024 264 Coils Coil 44 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g03024 Vivi-Chr3 51279040 51281747 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Vivi3g03024 BTB 9.5e-23 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g03024 K10523 - gmx:100794118 318.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g03024 3 51279040 51281747 Vivi3g03024 3 51279040 51281747 ECH