Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02995 ATGGCTGTGCAGTACTCAAAACAGCTGCTGCTGCTGCTGGTTGTTGCTGTCTTTCATACAAAAGCAGCAAATCAACCGATGTCACTTCCAAACTGTCCAACAATGTGTGGCTCGGTCACCATTCCTTTTCCATTTGGAACCACCAAGGATTGTTCCCTAGACAACACATTTCTCATCAACTGCAACAAAACATTTTCAACTACATCAAATTCAACAGCACTTGTACCTTTCTTGCCAAACACTAAACAAAGGGTCCTAAATATCTCACTTGATGGTGAACTGCGCGTTGCATGGCCAGTAGCCAGCGATTGCTACACTAAAAACAGTACACTCGTGGACCAAACAATTCAGGATATCAAAATGACTTATTTTCCTGTCTCGCCAACTCGAAACAAGTTGATAGCGGTTGGCTGTGACGCATTTGGAGTATTCTTTGCATTGGATTCTGGTGGAGAACATTACACCAGTGGATGTGTGGCTTTGTGTGACAGGCTTCATGATATTGGCGCCAATGAATCTTGTTCTGGCACTGGCTGTTGCGAGGTTTCAATACCCCACGGTCATGTGTTTAAGGATGTAGTCTATGCAACTCAAAGCATATTCCACAATCCGTCGTTAGTGCATAACTTCAATCCATGTGGTTATACGTTTTTGGTTGAAAATGGAGGATACAAGTTTGCAAACAAAGACCTCCTCAGGTTGGAGAAGAAAGAGTTTCCAGTGGTGTTGGATTGGGCAATAGGGAACCAAACGTGCCAGCAAGCTCAGAAGGATCTTTCAAGTTATGCATGTAAGGCTGACAAAAGTACATGTCACCATGCACAAACCTACAAATCCGGTTACCTTTGCAAATGCCTTAATGGATACCGGGGAAATCCTTACCTCAATCATGGTTGCCTAGATGTTAATGAATGCATGGAATCCAATGATTGTGTTAAGGGAGCAAGATGCAAAAATCTTCATGGAAGCTATCAGTGTAAATGCCCAGCAGGATATGAGGGAGACGGGAAAAATAATGGAACAAGATGCAGTCTCAAATCAAGAAAAGAGCTCATGTTGATCATTGCATTGAGTATCAGTGTAAGCATTGTAGGACTACTAATGGGAAGCATTTATGCACATTGGGCATTGAAGAAAATAAAGCTCATTAAACTTAAAGAGCAGTTTTTTCAACAAAACGGTGGCTTACTCTTACAACAACAGCTAATGAAGCATGGAGGATCAGTAGAAGCAACTAAAGTCTTCACTGCTGAGGAGCTAAATAAAGCAACCAACAACTTCGATGAAGAAAATATCATAGGCCAAGGTGGTCAGGGAACAGTTTACAAAGGAGTTTTACAGGATAACATAACCGTAGCAATAAAGAAGTCCAAAATCAATGACCCAAGCCAGGTTGAACCGTTCGTCAATGAAGTGATCCTGCTTTCTCAAATCAACCATAGAAATGTGGTAAAACTCTTGGGCTGTTGTTTAGAGACAGAAGTCCCCTTGCTTGTTTATGAATTTGTTTCCAACGGTACTGTTTACGAGCATCTTCATGATCTAAGTCAATCCTTAAAGCTTACATGGAAAACAAGACTAAGAATAGCAAAAGAAACTGCTGGTGTCCTGGCATACTTGCATTCGGCGGCTTCTACACCAATCATACATAGAGATGTGAAATCTACAAATATACTCCTAGATGAGAATCTCACTGCAAAGGTTTCCGACTTTGGAGCTTCGAGGATAGTTCCTCTTGATAAAACTCAGATAACAACTCTAGTGCAAGGGACAATGGGGTACCTTGACCCAGAATACTTCCAAACAAGCCAGTTAACAGAGAAGAGTGATGTCTATAGCTTTGGGGTTGTCTTAGCAGAGCTGCTGACAGGAAAGAAAGCATTGTGTTTTGGCAGGCCAGAGGTAGGTAGAAACCTTGCACTGTACTTTGTTTCTTCAATGAAAGAAGGTCTGTTATTTCATATTCTGGACAAAAATATTGATGAGGCAGATGTTGAGCATCTTAAGGAAGTTGCCCTAATTGCAGAGAGGTGTTTAAGGGTGAAGAGCGAGGAAAGACCGACCATGAAAGAAGTGGCAATGGGACTAGAAGGAATATTGGTTATTGAAGAGCAGTGTTGTGGAAGTGACTATTTGCCTTCGGAAGAGACTGGAAACATGCTCAATGCAGGATCATCTGTCATCAATGTTGAAGATAATGTGGGCGGAAGTGGCATTAATTCTTCGGACTCGTATAGCATTAACCAGATTTCGATGTCAGTGATCGGTGGAAGATAA 2277 0.4172 MAVQYSKQLLLLLVVAVFHTKAANQPMSLPNCPTMCGSVTIPFPFGTTKDCSLDNTFLINCNKTFSTTSNSTALVPFLPNTKQRVLNISLDGELRVAWPVASDCYTKNSTLVDQTIQDIKMTYFPVSPTRNKLIAVGCDAFGVFFALDSGGEHYTSGCVALCDRLHDIGANESCSGTGCCEVSIPHGHVFKDVVYATQSIFHNPSLVHNFNPCGYTFLVENGGYKFANKDLLRLEKKEFPVVLDWAIGNQTCQQAQKDLSSYACKADKSTCHHAQTYKSGYLCKCLNGYRGNPYLNHGCLDVNECMESNDCVKGARCKNLHGSYQCKCPAGYEGDGKNNGTRCSLKSRKELMLIIALSISVSIVGLLMGSIYAHWALKKIKLIKLKEQFFQQNGGLLLQQQLMKHGGSVEATKVFTAEELNKATNNFDEENIIGQGGQGTVYKGVLQDNITVAIKKSKINDPSQVEPFVNEVILLSQINHRNVVKLLGCCLETEVPLLVYEFVSNGTVYEHLHDLSQSLKLTWKTRLRIAKETAGVLAYLHSAASTPIIHRDVKSTNILLDENLTAKVSDFGASRIVPLDKTQITTLVQGTMGYLDPEYFQTSQLTEKSDVYSFGVVLAELLTGKKALCFGRPEVGRNLALYFVSSMKEGLLFHILDKNIDEADVEHLKEVALIAERCLRVKSEERPTMKEVAMGLEGILVIEEQCCGSDYLPSEETGNMLNAGSSVINVEDNVGGSGINSSDSYSINQISMSVIGGR 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02995 758 SUPERFAMILY Growth factor receptor domain 247 343 IPR009030 -
Vivi3g02995 758 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 22 700 IPR045274 GO:0007166
Vivi3g02995 758 SUPERFAMILY Protein kinase-like (PK-like) 411 700 IPR011009 -
Vivi3g02995 758 ProSitePatterns Calcium-binding EGF-like domain signature. 301 326 IPR018097 GO:0005509
Vivi3g02995 758 SMART serkin_6 427 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g02995 758 SUPERFAMILY EGF/Laminin 301 338 - -
Vivi3g02995 758 Pfam Calcium-binding EGF domain 301 343 IPR001881 GO:0005509
Vivi3g02995 758 Gene3D Laminin 250 343 - -
Vivi3g02995 758 Gene3D Transferase(Phosphotransferase) domain 1 503 708 - -
Vivi3g02995 758 FunFam Wall-associated receptor kinase 2 397 502 - -
Vivi3g02995 758 Gene3D Phosphorylase Kinase; domain 1 402 502 - -
Vivi3g02995 758 CDD STKc_IRAK 433 699 - -
Vivi3g02995 758 Pfam Protein tyrosine and serine/threonine kinase 430 693 IPR001245 GO:0004672|GO:0006468
Vivi3g02995 758 SMART egfca_6 301 344 IPR001881 GO:0005509
Vivi3g02995 758 FunFam Fibrillin 2 296 339 - -
Vivi3g02995 758 CDD EGF_CA 301 335 - -
Vivi3g02995 758 Pfam Wall-associated receptor kinase galacturonan-binding 32 95 IPR025287 GO:0030247
Vivi3g02995 758 SMART egf_5 263 300 IPR000742 -
Vivi3g02995 758 SMART egf_5 304 344 IPR000742 -
Vivi3g02995 758 ProSiteProfiles Protein kinase domain profile. 427 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g02995 758 FunFam Wall-associated receptor kinase 2 503 717 - -
Vivi3g02995 758 ProSiteProfiles EGF-like domain profile. 301 344 IPR000742 -
Vivi3g02995 758 ProSitePatterns Serine/Threonine protein kinases active-site signature. 548 560 IPR008271 GO:0004672|GO:0006468
Vivi3g02995 758 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 317 328 IPR000152 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02995 Vivi-Chr3 49944284 49947517 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02995 12 715 Receptor kinase-like Gene Family AT1G21230 45.816 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Vivi3g02995 PK_Tyr_Ser-Thr 7.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02995 - - mtr:25489730 1068.91