Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02962 ATGTCTGAGGGAAGAGGCAGTGCATCTATGAACATAGTCACTATGATGATTTCCCTCATATGCCTTTTGTTTCTGGCTGAAAATATTAATGCAGAAACTCACATTGTTGGTGGAGTTAAAGGCTGGACATTCAACACCAAAAATTGGCCTAATGGAAAAGAATTTAGTGCCGGCGACGTGCTCGTTTTCAACTATAATTCAAAGATGCACAATGTGGTTGCCGTGGACAAAGCTGGATACACCAGCTGCAAAACGCCGGCAGCAGCTGGTTACCAAACGTTCACTTCAGGGAGTGATCAGATCAAGCTAGAAAGTGGGGAGAATTACTTCATATGCAACTTTCCTGGTCACTGTCAAACTGGGATGAAGATTTTCATCAATGCAGTCTAG 390 0.4308 MSEGRGSASMNIVTMMISLICLLFLAENINAETHIVGGVKGWTFNTKNWPNGKEFSAGDVLVFNYNSKMHNVVAVDKAGYTSCKTPAAAGYQTFTSGSDQIKLESGENYFICNFPGHCQTGMKIFINAV 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02962 129 PANTHER BLUE COPPER PROTEIN 26 127 IPR039391 GO:0009055
Vivi3g02962 129 FunFam basic blue protein-like 32 128 - -
Vivi3g02962 129 SUPERFAMILY Cupredoxins 33 128 IPR008972 -
Vivi3g02962 129 CDD Plantacyanin 33 128 IPR041844 -
Vivi3g02962 129 Pfam Plastocyanin-like domain 42 122 IPR003245 GO:0009055
Vivi3g02962 129 ProSiteProfiles Phytocyanin domain profile. 32 129 IPR003245 GO:0009055
Vivi3g02962 129 ProSitePatterns Type-1 copper (blue) proteins signature. 106 122 IPR028871 -
Vivi3g02962 129 Gene3D - 32 129 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02962 Vivi-Chr3 49563015 49563751 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02962 1 129 Phytocyanin Superfamily AT1G17800 36.691 7.24e-23 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02962 - - gmx:100788635 179.874