Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02957 ATGTCTAAGGGAAGAGGCAGTGCATCTATGAACATAATCACTATGATGCTTTCACTACTTCTCCTTTTGATCCTACTTGAAAGTGCTAATGCAGCAACTTACAACGTTGGAGGACCTGGTGGATGGACCTACAACACTGATACTTGGCCTACTGGAAAAAAGTTTAGAGCTGGTGATGTTCTCATTTTCAACTATGATTCAACGATACATAATGTTGTGGCTGTGGACAAAGGTGGATATGGGAGCTGCAAGGCATCAGGAGGTGCAAAAGTGTTTAGTTCAGGGAGTGATCAGATCAGGCTAGCAAGAGGGCGAAACTACTTCATATGTAGCATTCCTGGTCACTGCCAATCTGGGATGAAGGTTTTCATCAATGCAGTTTAG 384 0.4323 MSKGRGSASMNIITMMLSLLLLLILLESANAATYNVGGPGGWTYNTDTWPTGKKFRAGDVLIFNYDSTIHNVVAVDKGGYGSCKASGGAKVFSSGSDQIRLARGRNYFICSIPGHCQSGMKVFINAV 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02957 127 PANTHER BLUE COPPER PROTEIN 28 125 IPR039391 GO:0009055
Vivi3g02957 127 FunFam basic blue protein-like 32 126 - -
Vivi3g02957 127 Pfam Plastocyanin-like domain 43 120 IPR003245 GO:0009055
Vivi3g02957 127 Gene3D - 32 127 IPR008972 -
Vivi3g02957 127 ProSiteProfiles Phytocyanin domain profile. 32 127 IPR003245 GO:0009055
Vivi3g02957 127 CDD Plantacyanin 32 126 IPR041844 -
Vivi3g02957 127 ProSitePatterns Type-1 copper (blue) proteins signature. 104 120 IPR028871 -
Vivi3g02957 127 SUPERFAMILY Cupredoxins 32 126 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02957 Vivi-Chr3 49363213 49364003 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02957 1 127 Phytocyanin Superfamily AT1G17800 38.686 4.36e-26 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02957 - - gmx:100788635 200.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02957 3 49363213 49364003 Vivi3g02957 3 49363213 49364003 ECH