Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02950 ATGGTACCTCCGGGTCCAGGCCCATCACCTCCCATTGGTGGTGGTCCTCAGTCTCTCTCACCTTCACTAATGAGAACACATTCAGGAGTGATGGGATCTCAAGGGGCTCCCATGTCATTGCAGACGTCTTTCCCTTCGCTTGTGTCTCCTCGTACCCAGTTCGGCAACATGAACATTCTAGGAAATATGTCCAATATGACTTCTATGCTGAATCAATCTTTCTCAAATGGAGTTCCGAATCACGGAAGTAGCCAACGTGGAGGGATTGAAACTGGAGCTGAAGCAGGCCAACTTTCTAGTGTTGGCAATGGAATGAGCTTTGGTAGTTCTCCATCCTCATATGTACAAGGGAATATGGCGAATGCTGGTTCCTCTGGTCAAGTTCAGGGTCAACAATTTTCCAATCCTTCTATCAACCAACTGTTGCCAGATCATCAGCATTCTCAACATCTTGATCCTCAAAATTTCCAACACAGCCAGCAGTCAATGCAACAGTTCTCTTCTCTGAATACACAGCAGCAACAGCATTATCAATCAATGCGAGGAGGAATAGGTGGAAGTGGAATGGGACCAGTGAAGTTAGAGCCCCAGGTAAACAACGACCAACTAGGACAGCAACAGCTGCAATCAATGAGGAATCTTCCTCCAGTGAAATTGGAACAACAACAAATTCAAACAATGAGAACTCTGGCACCAGTTAAAATGGAGCCCCAGCATTGTGATCAACCATCATTTTTGCAGCAACAACAATTCCTCCACATGTCGAGACAATCTTCTCAGGCTGCTGCTGCTCAGATCAATCTTTTGAACCATCACAGGCTTTTACAGCTTCAACAACAGCAGCAACAGCTTTTAAAGTCAATGCCTCAACAACGGTCTCAATTACCACAACAGTTTCAACAGCAGAATATGCCTGCGAGGTCTCCTGTGAAACCAGCATATGAACCAGGGATGTGTGCAAGGCGGCTGACACACTATATGTATCAGCAAAAACATAGACCAGAGGATAACAACATCGAGTTTTGGAGGAAGTTTGTTGCTGAGTATTTTGCTCCTAATGCTAAGAAGAAGTGGTGTGTCTCTATGTATGGAAGTAGCAGACAAACAACTGGAGTTTTCCCTCAGGATGTATGGCACTGCGAAATATGTAATCACAAACCTGGCCGTGGGTTTGAAGCAACTGTCGAGGTTCTTCCCAGGCTTTTCAAAGTAAAGTATGACAGTGGCACTCTGGAAGAGCTACTTTATGTTGACATGCCCCGCGAATATCATAATTCCTCTGGCCAGATTGTTCTAGACTATGCAAAAGCAATACAAGAAAGTGTTTTTGAGCAGCTTCGTGTTGTTCGTGATGGTCAACTTCGAATAGTTTTTTCTCCAGACTTGAAGATATGCTCTTGGGAATTTTGTGCTCGGCGCCATGAAGAGCTCATCCCCAGAAAACTGTTAATACCCCAGATTAGTCAGATTGGAGCGGTTGCCCAGAAATACCAGGCTTTAACTCAAAATGCAACACCCAATATTTCTGCTCCAGAGTTACAAAATAATTGCAATATGTTTGTTGCTTCAGCTCGTCAATTGGCTAAAACCCTAGAAGTTCCATTAGTTAATGATTTAGGATATTCAAAGACATATGTACGCTGCCTACAGATATCAGAAGTGGTAAATAGCCTGAAAGACTTGATGGATTACAGTAAAGATACAGTGACCGGACCTATGGAGAGCTTGGCCAAGTTCCCTCGGAGAACAGTTAATTCATGCGGAGTTCGTAATCAAGCTCAACAGCATGAAGATCAATTAAAACTACAGCAGCAGCAGCAGCAACAGCAAATGATGGTCTATAACTCAAATGGAGATCAGAATCCAGTGCAAGCTGCTGCCATGCAAATTGCATCCAGCAACGGTATGGTTAGTGTAAATAGTTCTGTCAACTCAGCTTCTGCATCGACAACCACAAGCACCATTGTTGGACTTCTCCACCAAAACTCTGTGAATTCTAGACAAAATACAATGAACAATGCAAGCAGTCCATATGGAGGTTGTTCCGTTCAGATTCCATCTCCAGGTTCCTCCAGTACTGTGCCACAGGCCCAGCCAAACTCATCCCCTTTTCAATCACCACCGACACCATCCTCATCTAATAACCCCCCACAAACACCTCGTTCTACTTTAACACCTCCCAATCAAATGAATACAACAAATTCAATTGCTAATGTTTCGCTCCAACAACAACATCAATATCAATCATCTCTTTCTGGTGATGCTGATCCAAGTGATCCTCATAGCTCAGTCCATAAAATCATACAGGAGATGATGATGTCCTCGCAGATGAATGGTACTGGAGGAATGGCAGGTGCTGGTTCTCTAGGAAATGACATGAAGAATGGAAGCAATAATCTGCCAATGAGTACAAATACAGGGCTCAATAATGGTAATGGCACACTGAACAATAATCCAGGTGCTGGTAGTTATGGAACAATGGGGTTCGGTCAATCCACTATGCCTAATGGAATGAGAGCTGCTATGGTTAATAATTCAATCATGAATGGAAGGGGAGGAATGCCATCCATAGCGCGGGATCAAGCTATGAACCATCAACAGGATCTGTCAAACCAATTGCTTAGTGGTCTAGGAGCAGCGAACGGTTTTAATAATCATCAATTTGATTGA 2670 0.4367 MVPPGPGPSPPIGGGPQSLSPSLMRTHSGVMGSQGAPMSLQTSFPSLVSPRTQFGNMNILGNMSNMTSMLNQSFSNGVPNHGSSQRGGIETGAEAGQLSSVGNGMSFGSSPSSYVQGNMANAGSSGQVQGQQFSNPSINQLLPDHQHSQHLDPQNFQHSQQSMQQFSSLNTQQQQHYQSMRGGIGGSGMGPVKLEPQVNNDQLGQQQLQSMRNLPPVKLEQQQIQTMRTLAPVKMEPQHCDQPSFLQQQQFLHMSRQSSQAAAAQINLLNHHRLLQLQQQQQQLLKSMPQQRSQLPQQFQQQNMPARSPVKPAYEPGMCARRLTHYMYQQKHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSSRQTTGVFPQDVWHCEICNHKPGRGFEATVEVLPRLFKVKYDSGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRKLLIPQISQIGAVAQKYQALTQNATPNISAPELQNNCNMFVASARQLAKTLEVPLVNDLGYSKTYVRCLQISEVVNSLKDLMDYSKDTVTGPMESLAKFPRRTVNSCGVRNQAQQHEDQLKLQQQQQQQQMMVYNSNGDQNPVQAAAMQIASSNGMVSVNSSVNSASASTTTSTIVGLLHQNSVNSRQNTMNNASSPYGGCSVQIPSPGSSSTVPQAQPNSSPFQSPPTPSSSNNPPQTPRSTLTPPNQMNTTNSIANVSLQQQHQYQSSLSGDADPSDPHSSVHKIIQEMMMSSQMNGTGGMAGAGSLGNDMKNGSNNLPMSTNTGLNNGNGTLNNNPGAGSYGTMGFGQSTMPNGMRAAMVNNSIMNGRGGMPSIARDQAMNHQQDLSNQLLSGLGAANGFNNHQFD 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02950 889 MobiDBLite consensus disorder prediction 724 757 - -
Vivi3g02950 889 Pfam LIM-domain binding protein 322 576 IPR029005 -
Vivi3g02950 889 MobiDBLite consensus disorder prediction 1 15 - -
Vivi3g02950 889 MobiDBLite consensus disorder prediction 1 36 - -
Vivi3g02950 889 Coils Coil 590 610 - -
Vivi3g02950 889 MobiDBLite consensus disorder prediction 667 763 - -
Vivi3g02950 889 MobiDBLite consensus disorder prediction 701 723 - -
Vivi3g02950 889 MobiDBLite consensus disorder prediction 19 36 - -
Vivi3g02950 889 MobiDBLite consensus disorder prediction 96 181 - -
Vivi3g02950 889 MobiDBLite consensus disorder prediction 667 700 - -
Vivi3g02950 889 PANTHER LIM DOMAIN-BINDING PROTEIN 40 883 IPR029005 -
Vivi3g02950 889 MobiDBLite consensus disorder prediction 96 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02950 Vivi-Chr3 49227155 49233293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02950 8 889 C2H2 Transcription Factor Family AT1G43850 56.522 0.0 701
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02950 3 49227155 49233293 Vivi3g02950 3 49227155 49233293 ECH