Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02927 ATGGGAAAGTGTTGGTTTGTTGGTGTCTTGATTCTTTTAGGTTATGTATGCTTGTTGGGTAATATTTTTAGGGTAGAAGGGTACCCTATTGAAGATTTGGTTGAGAGGTTACCAGGACAACCTAAGGTTAAATTTAGTCAATATGCTGGCTATGTTGATATAGATGTAAAGCATGGGAGGAGTCTCTTCTACTATTTTGTCGAGGCTGAGCATCATGCTCACAAAAAACCCCTGACCCTTTGGCTCAATGGAGGTCCGGGATGTTCTTCCATCGGAGGAGGTGCTTTTACTGAATTAGGACCATTTTATCCCAAGGGTGATGGACGTGGTTTACGGAGGAATTCAAAGTCTTGGAATAAAGTTTCAAATCTTCTGTTTGTGGAGTCTCCTGCTGGAGTTGGATGGTCATACTCAAATACAACTTCTGATTATATCATTGGTGATGATGCAACAGCCAATGATATGGTTTTGTTCTTGCTGAAATGGTACAAGAAATTCCCTTCTTATCGATCAAGAAAGTTGTTTTTGACTGGAGAAAGCTATGCAGGACATTACATCCCACAGTTAGCTAATGCTATTCTTGATTATAATCTTCTTCACTCAAATGGTTTCAAATTCAATATAAAAGGACTCGCGATCGGAAACCCTCTTCTGAAATTGGATCGTGATACACAGGCAACATATGAATATTTCTGGTCACACGGAATGATTTCAGATGAAATCGGTCTTGCTCTTACGCGTGATTGTGATTTTGATGATTATACTTATGCAAATCCTCATAACATATCCAAATCATGCAATGATGCTATAAATGATGCTAATAAAATTGTTGGCCAGTATATAAACTACTATGATGTGATTCTTGATGTTTGTTATCCATCCATAGTTCAACAAGAACTGAAACTGAAAAAAATGGCTCTTCATGCTAATCGTACCAGTTTGCCATATTCATGGTCCATGTGTAGTGATATTTTAAATTATAGTTTATCAGATCCTAATATTGACATGCTTCCAAGTTTGAAACGGATAGTGCAGAATCATATTCCAATATGGATTTACAGTGGAGACCAAGATTCAGTTGTGCCATTACTAGGTACTCGAACACTCATTCGTGAACTAGCTCATGACTTGAAATTCAATATTACTGATCCATATAGAGTTTGGTTTCACAAAGGACAGGTTGGAGGTTGGGTAACTGAGTATGGAAAATTGTTAACTTTTGCCACTGTAAGAGGAGCTGGTCACATGGTACCATATGGACAACCTTCAAGATCATTGCATCTATTTCAATCCTTTTTGAGTGGGAGGAGATTGCCAAATACTACTCGACCTTCGATTGATGAATGA 1347 0.3794 MGKCWFVGVLILLGYVCLLGNIFRVEGYPIEDLVERLPGQPKVKFSQYAGYVDIDVKHGRSLFYYFVEAEHHAHKKPLTLWLNGGPGCSSIGGGAFTELGPFYPKGDGRGLRRNSKSWNKVSNLLFVESPAGVGWSYSNTTSDYIIGDDATANDMVLFLLKWYKKFPSYRSRKLFLTGESYAGHYIPQLANAILDYNLLHSNGFKFNIKGLAIGNPLLKLDRDTQATYEYFWSHGMISDEIGLALTRDCDFDDYTYANPHNISKSCNDAINDANKIVGQYINYYDVILDVCYPSIVQQELKLKKMALHANRTSLPYSWSMCSDILNYSLSDPNIDMLPSLKRIVQNHIPIWIYSGDQDSVVPLLGTRTLIRELAHDLKFNITDPYRVWFHKGQVGGWVTEYGKLLTFATVRGAGHMVPYGQPSRSLHLFQSFLSGRRLPNTTRPSIDE 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02927 448 ProSitePatterns Serine carboxypeptidases, serine active site. 176 183 IPR018202 GO:0004185
Vivi3g02927 448 Pfam Serine carboxypeptidase 39 435 IPR001563 GO:0004185|GO:0006508
Vivi3g02927 448 Gene3D - 304 325 - -
Vivi3g02927 448 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 33 422 IPR001563 GO:0004185|GO:0006508
Vivi3g02927 448 Gene3D alpha/beta hydrolase 30 292 IPR029058 -
Vivi3g02927 448 SUPERFAMILY alpha/beta-Hydrolases 35 438 IPR029058 -
Vivi3g02927 448 FunFam Carboxypeptidase 336 435 - -
Vivi3g02927 448 ProSitePatterns Serine carboxypeptidases, histidine active site. 405 422 IPR033124 GO:0004185
Vivi3g02927 448 PRINTS Carboxypeptidase C serine protease (S10) family signature 114 126 IPR001563 GO:0004185|GO:0006508
Vivi3g02927 448 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 137 IPR001563 GO:0004185|GO:0006508
Vivi3g02927 448 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 187 IPR001563 GO:0004185|GO:0006508
Vivi3g02927 448 PRINTS Carboxypeptidase C serine protease (S10) family signature 405 418 IPR001563 GO:0004185|GO:0006508
Vivi3g02927 448 FunFam Carboxypeptidase 28 293 - -
Vivi3g02927 448 Gene3D - 336 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02927 Vivi-Chr3 48804797 48810707 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02927 296 438 Calmodulin-binding Proteins AT2G22960 30.137 4.93e-14 68.6