Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02925 ATGAGAATGGGAAAGTGTTGGTTTGCTGGTGTGTTGATTGTTTTGGGTTATGTATGCTTGTTGGGCACTACTTCTAGGGTAGAAGGGTACCCTATTGAAGATTTGGTAGAGAGGTTACCAGGGCAACCCAAGGTTAACTTTAGTCAATATGCTGGCTATGTTGATATTGATGTAAAGCATGGGAGGAGTCTCTTCTACTATTTTGTTGAGGCTGATCATCATCCTCACAAAAAGCCTCTCACTCTTTGGCTCAATGGAGGTCCTGGATGTTCTTCCATTGGAGGAGGTGCTTTTACTGAATTAGGACCGTTTTATCCTAAGGGTGATGGACGTGGTTTACGTAGGAATTCAAAGTCTTGGAATAAAGTTTCAAATCTTCTGTTTGTGGAGTCTCCTGCTGGAGTTGGTTGGTCATACTCGAATACAACTTCTGATTATATCAAGGATGATGCCTCCACAGCAAATGATATGGTTTTATTCTTGCTGAAATGGTACGAGAAATTCCCTTCTTACAAATCAAGAAAGTTGTTTTTGACCGGAGAAAGCTATGCAGGACATTACATACCACAGTTAGCTAATGCTATTCTTGATTATAATCTTCATCACCCCACTGGTTTCAAATTCAATATAAAAGGACTCGCGATTGGAAACCCACTTTTGAAATGGAATAAAGATAGACGTACAACATATGAATTTTTCTGGTCACACGGAATGATTTCAGATGAACTTGGAGTCGCAATCATGGATGATTGCGATTTTGATGATTATTATTATGGAGATCATCAAAATTTATCCGAGTCATGCAACAATGCCTTAACCGATGCTAATAAAATCGTGGGCAAGTATATAAACGTATATGATGTGATTCTTGATGTTTGTTATCCAGCCATAGCTGAACAAGAAATGAGATTGAAAAAGATGTTACATAATATAAGTTTAGGCGTAGATGTCTGTATTGAATCCGAAACCAAGTTTTACCTTAACCTTCCAGAGGTTCAGAAGGCTCTTCATGCCAATCGTACCAAATTATCATATCCCTGGTCCGATTGTAGTAATCTTTTAAATTATAGTAATACAGATCCTGATATCAATATGCTTCCAATTCTCAAACGGATAATTCAAAACCATATTCCAATATGGATTTTCAGCGGAGACCAAGATTCAGTTATACCATTAATCGGATCTCGAACACTCGTTCGTGAATTAGCTCATGACCTAAAATTCAAGATTACTGATCCATATAGAGTTTGGTTTCACAAAGGACAGGTTGGAGGTTGGGTAACTGAGTATGGAAAACTGTTAACTTTTGCTACTGTAAGAGGAGCTGGTCATATGGTACCATATGCACAACCTTCTAGGGCATTGGATCTATTCAAATCTTTTTTGCATGGCATGAGATTGCCAAACACTACTCGACCTTCAATTAGTGATGATGGAGCTGTTAGCTATATACAACATATGGAGTTAGTAGATTCTTATTAG 1482 0.3799 MRMGKCWFAGVLIVLGYVCLLGTTSRVEGYPIEDLVERLPGQPKVNFSQYAGYVDIDVKHGRSLFYYFVEADHHPHKKPLTLWLNGGPGCSSIGGGAFTELGPFYPKGDGRGLRRNSKSWNKVSNLLFVESPAGVGWSYSNTTSDYIKDDASTANDMVLFLLKWYEKFPSYKSRKLFLTGESYAGHYIPQLANAILDYNLHHPTGFKFNIKGLAIGNPLLKWNKDRRTTYEFFWSHGMISDELGVAIMDDCDFDDYYYGDHQNLSESCNNALTDANKIVGKYINVYDVILDVCYPAIAEQEMRLKKMLHNISLGVDVCIESETKFYLNLPEVQKALHANRTKLSYPWSDCSNLLNYSNTDPDINMLPILKRIIQNHIPIWIFSGDQDSVIPLIGSRTLVRELAHDLKFKITDPYRVWFHKGQVGGWVTEYGKLLTFATVRGAGHMVPYAQPSRALDLFKSFLHGMRLPNTTRPSISDDGAVSYIQHMELVDSY 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02925 493 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 35 451 IPR001563 GO:0004185|GO:0006508
Vivi3g02925 493 SUPERFAMILY alpha/beta-Hydrolases 37 467 IPR029058 -
Vivi3g02925 493 Gene3D - 318 354 - -
Vivi3g02925 493 FunFam Carboxypeptidase 30 295 - -
Vivi3g02925 493 FunFam Carboxypeptidase 365 464 - -
Vivi3g02925 493 ProSitePatterns Serine carboxypeptidases, serine active site. 178 185 IPR018202 GO:0004185
Vivi3g02925 493 Gene3D - 365 464 - -
Vivi3g02925 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 128 IPR001563 GO:0004185|GO:0006508
Vivi3g02925 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 164 189 IPR001563 GO:0004185|GO:0006508
Vivi3g02925 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 434 447 IPR001563 GO:0004185|GO:0006508
Vivi3g02925 493 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 139 IPR001563 GO:0004185|GO:0006508
Vivi3g02925 493 Gene3D alpha/beta hydrolase 32 294 IPR029058 -
Vivi3g02925 493 Pfam Serine carboxypeptidase 40 464 IPR001563 GO:0004185|GO:0006508
Vivi3g02925 493 ProSitePatterns Serine carboxypeptidases, histidine active site. 434 451 IPR033124 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02925 Vivi-Chr3 48778113 48780447 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02925 323 467 Calmodulin-binding Proteins AT2G22960 26.207 1.71e-12 64.3