Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02918 ATGGGGAACGTTACAGTTCCTTTTGTAGGGATGATAATTGCAGAGTGTGTTCAAGTCGCGTTAATCATATTAAGCAAACAAGTCATGGCACAAGGAATGACCAGTTTCATTTTCATTTTCTACTCCAATTCCATCGCTGCTCTTGTTCTTCTTCCATCTTCTTTCTACATCCACAGATTTCAACGTCCTCCAATTACGTTTTCTAGTCTCTCTGGATTCTTCTTACTTGGAGTACTTGGGTATTTGGCGCAGGTTTTTGGATATGCTGGGATTTATTATAGCTCTTCAACACTTGCTACTGCGATGCTTAATCTTATTCCTGGTTTTACCTTCATACTTGCCGTTCTTTTTAGAATGGAACAATTAGATTGGAAAAGCTATAGCAGCCTAGCAAAATCATTGGGAACAATAGTATCAATTGCCGGTGCTTTTATTGCGACTTTGTACAAGGGTGTTGCACTTCTCAAGACACCATCATCACCTGTAAACTTATCTCAGCAGCTAGCTTTCTCACAAGATACTAGTTGGATAATTGGAGGATCATTTCTAGCAGCTGATTGTGTAGTGGCTTCAGCATTTATAATAGTACAGGCTTCTATTCTTAAGAAATATCCAGCAGGGCTGATTGTTGTATTCTTTTATTGTTTCTTCGTGGCCATTCTATCCGCCGTGACATGTTTGGTTGTGGAAAGAGACATCAATGCTTGGAGCTTGCAACCCAAGCTAAGGTTGCTATCAGTTTTATACTCGGGAGTGTTTGGCTCTGCATTTCAAGTTGGTGTGACTACTTGGTGTTTGCACCAGACAGGACCTGTTTTTGTTTCCATGTTCAAGCCAATAGGAATTGTCATATCGGTGGTTGTAGGTGTTGTCTTCCTCGGTGATGCATTCTATCTCGGAAGTTTGATTGGTGCTACTGTGATTGTTATTGGGTTTTATTCTGTATTGTGGGGGAAATCCAAAGATATTGAAGCGATAAGCTTGGAATCAAGAGGCAACCAGGCTCCCCTTTTGAAGGAAAACAGCAGTGAAAACATATAA 1041 0.4044 MGNVTVPFVGMIIAECVQVALIILSKQVMAQGMTSFIFIFYSNSIAALVLLPSSFYIHRFQRPPITFSSLSGFFLLGVLGYLAQVFGYAGIYYSSSTLATAMLNLIPGFTFILAVLFRMEQLDWKSYSSLAKSLGTIVSIAGAFIATLYKGVALLKTPSSPVNLSQQLAFSQDTSWIIGGSFLAADCVVASAFIIVQASILKKYPAGLIVVFFYCFFVAILSAVTCLVVERDINAWSLQPKLRLLSVLYSGVFGSAFQVGVTTWCLHQTGPVFVSMFKPIGIVISVVVGVVFLGDAFYLGSLIGATVIVIGFYSVLWGKSKDIEAISLESRGNQAPLLKENSSENI 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02918 346 Pfam EamA-like transporter family 11 144 IPR000620 GO:0016020
Vivi3g02918 346 Pfam EamA-like transporter family 184 316 IPR000620 GO:0016020
Vivi3g02918 346 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 148 - -
Vivi3g02918 346 SUPERFAMILY Multidrug resistance efflux transporter EmrE 220 320 - -
Vivi3g02918 346 PANTHER WAT1-RELATED PROTEIN 6 323 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02918 Vivi-Chr3 48702125 48704556 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02918 6 345 Nodulin-like Gene Family AT5G40230 43.931 8.65e-91 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02918 - - gmx:100804932 524.628