Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02914 ATGTCGAACAATGCATTAAATTTTCTTATCTTGTTTCTAAGTATCTCTTTGTTTCCATTCGTTTCTTCTCTTAACCAAGAAGGTCTCTCTTTACTTTCATGGCTTTCGACTTTCAATTCATCGAATCCGGATACTAGTACTGCTATTTTCTCGTCATGGGATCCAGCACACAGAAATCCTTGCAGATGGGACTATATAAAGTGTTCTGCAGAAGAGTTTGTTGAAGAGATCGTCATAACGTCTATCGATCTTCGTAGCGAGTTTCCTACACAGTTTCTTTCTTTTAACCACCTTAGAACTCTTGTTATCTCGAATGGAAATCTCACAGGTGAGATTCCGAGTTCTGTTGGAAACTTGTCGTCGTCACTGGTTACTCTTGATCTTAGTTTCAATAGTTTAACAGGAAAAATACCAGAAGAAATAGGAAAGTTATATGAACTGAGATGGTTGTCTTTGAATTCGAATTCGTTACGAGGTGGAATTCCAACAACGATTGGTAACTGTTCGAAGCTTCAGCACTTGGAACTGTTTGACAACCAGCTTTCTGGTATGATTCCTGGAGAGATAGGACAGTTGAAGGCTCTTGAGTCGCTGCGAGCCGGTGGAAACCAAGGTATTTTCGGAGAAATTCCAATGCAGATATCAGATTGTAAGGCTTTAGTTTTTCTCGGACTTGCGGTTACTGGAATTTCCGGTGAGATTCCGGCAAGTATAGGAGAACTTCAAAATCTGAAGACACTTTCAGTCTACACAGCACATCTCACAGGTCAAATTCCAGCAGAGATTCAAAACTGTTCAGCTTTGGAAGATTTGTTTCTGTATGAGAATCAGCTTTCTGGAAAAATTCCTTACGAATTCGGTTCCATGCAAAGCCTTAAGAGGGTATTGCTGTGGAAGAACAATTTAACTGGAACGATTCCGGAAAGCCTCGGAAACTGTACGAATCTGAAGGTGATTGATTTCTCTTTGAATTCTCTGATTGGTAAGTTACCTTTGACTCTAAGTAATCTTCTCTCATTGGAGGAATTTCTTTTGTCTGATAATAACATTTACGGCGAAATACCTTCATATGTTGGAAATTTTTCCATGCTAAAGCAACTTGAGCTCGATAATAACCGATTCTCTGGCGAGATTCCGTCTGTTATGGGGAACTTGAAGGAGCTCACTCTTTTCTATGCATGGCAGAATCAGCTTAATGGAAATATACCAACAGAATTATCTAACTGTCAGAAACTCGAAGCAGTTGATCTTTCGCACAATTTCCTCACCGGTCCAATTCCGAATTCTCTCTTTCATCTGCAGAATTTAACACAGTTTTTGCTGATATCAAACAGTCTTTCAGGTCAAATTCCACCCGATATTGGAAAATGCACAAGCTTGATCAGGTTAAGACTTGGATCAAACAATTTCACCGGTCAAATTCCGCGAGAAATAGGCCTTTTGAAAAGTTTAACCTTTCTGGAGCTGTCAGATAATCAACTCAGTGAAGATATTCCTAATGAGATAGGTAACTGTGCTCATTTAGAAATGCTTGACTTGCATAAAAATGAGCTTCAAGGAACCATTCCTTCATCATTAAAATTCTTAGTCGATCTCAACGTCTTGGATCTTTCATCAAACCAAATCACCGGAAGCATTCCCAAGAGCTTAGGCAAGCTTACGTCGTTAAATAAGTTGATTCTAAGCGGAAACCTTATCGCCGGTTCGATCCCTCAGTCGCTAGGACTTTGTAAGGATTTGCAGTTGCTTGATTTAAGTAACAATAAGATCATAGGTTCTATTCCCAATGAGATTGGTTACTTGCAAGGATTGGATATACTCTTGAACTTGAGTTGGAATTCTCTTACTGGTTCAATTCCAAAGACTTTTTCGAATCTCTCGAAACTTTCAATCTTGGACCTATCTTACAACAAGATCACAGGTACTCTTTTTGTACTTGGTAATCTTGATAATCTTGTGTCTCTAAATGTTTCATACAATAGATTCTCTGGTACTCTTCCCAACACGAAGTTCTTCGAAGATTTACCTTCTTCTGCGTTCGCCGGTAACCCTGATCTTTGCATTAACAGCAAGTGTCGTGCGACCGGAAGTCTCGAAGGAAACAAATCGATAAGAAATATTATCATCTACACTTTCCTTGGTGTTATTTTAACTTCTGCTATTGTCACTTGTGGAGTTATTTTAGCACTAAGGATTCAAGGGGACAGTTTTTATGGGAGAAATAATTTCGATGAAGTTGAAATGGAATGGTCTTTCACTCCATTCCAGAAGATTAACTTCAACATCAACGACGTGGTTTCAAAGTTGTCGGATTCAAATATCGTCGGAAAGGGTTGCTCGGGCGTTGTTTACCGCGTAGAGACTTCGACAAAACAGATTATTGCGGTGAAGAAGCTATGGCCTATAAAGAACGAAGAGCCACCAGAGCGAGATTTTTTTACAGCAGAAGTTCAGACGCTTGGATCGATAAGGCATAAGAATATAGTAAGACTTTTAGGATGCTGCAACAACGGAAGAACTAGATTGCTGTTGTTTGATTACATATGTAATGGAAGTTTGTTTGGATTGCTCCATGAAAAGAGATTGTTCTTGGATTGGGATGCAAGGTATAAGATCATACTTGGAACAGCTCATGGTTTGGAATATCTTCATCATGATTGTATCCCTCCAATCGTCCATCGCGACGTTAAGGCTAACAACATCTTGGTCGGTCCACAGTTTGAAGCTTTTCTTGCTGATTTCGGCCTTGCAAAATTGGTCATTTCCTCAGATTGCTCAAGAGCCTCGCATGTAGTTGCAGGTTCTTACGGATACATAGCTCCCGAATATGGATACAGTTCAAGGATCACGGAAAAGAGCGACGTGTACAGTTACGGTGTCGTGCTTCTCGAGATGTTAACCGGAATGGAACCAACCGATAACAGGATTCCAGAGAGTGCTCACATTGTAACATGGGTTATCAGTGAAATCAGAGAGAAGAAAAGAGAATTCACATCCATTCTTGATCAGCAATTACTATTGCAATGTGGAACAAGAACACAAGAGATGCTTCAAGTCTTAGGAGTGGCTCTTCTCTGTGTGAATCCATCACCAGAAGAAAGACCAACAATGAAAGATGTAACAGCAATGCTCAAGGAGATTAGCCATGAAAATGATGATATGGATAAACCCAATCTTCTGCATAATAAAGGCATGGTTACCAATCCTAAAGCAGCAGTTCATTGTTCTAGTTTCTCAAGATCATGTGAACTTTTGATAGAATCATCATCTTCTTCTTCATAG 3282 0.3964 MSNNALNFLILFLSISLFPFVSSLNQEGLSLLSWLSTFNSSNPDTSTAIFSSWDPAHRNPCRWDYIKCSAEEFVEEIVITSIDLRSEFPTQFLSFNHLRTLVISNGNLTGEIPSSVGNLSSSLVTLDLSFNSLTGKIPEEIGKLYELRWLSLNSNSLRGGIPTTIGNCSKLQHLELFDNQLSGMIPGEIGQLKALESLRAGGNQGIFGEIPMQISDCKALVFLGLAVTGISGEIPASIGELQNLKTLSVYTAHLTGQIPAEIQNCSALEDLFLYENQLSGKIPYEFGSMQSLKRVLLWKNNLTGTIPESLGNCTNLKVIDFSLNSLIGKLPLTLSNLLSLEEFLLSDNNIYGEIPSYVGNFSMLKQLELDNNRFSGEIPSVMGNLKELTLFYAWQNQLNGNIPTELSNCQKLEAVDLSHNFLTGPIPNSLFHLQNLTQFLLISNSLSGQIPPDIGKCTSLIRLRLGSNNFTGQIPREIGLLKSLTFLELSDNQLSEDIPNEIGNCAHLEMLDLHKNELQGTIPSSLKFLVDLNVLDLSSNQITGSIPKSLGKLTSLNKLILSGNLIAGSIPQSLGLCKDLQLLDLSNNKIIGSIPNEIGYLQGLDILLNLSWNSLTGSIPKTFSNLSKLSILDLSYNKITGTLFVLGNLDNLVSLNVSYNRFSGTLPNTKFFEDLPSSAFAGNPDLCINSKCRATGSLEGNKSIRNIIIYTFLGVILTSAIVTCGVILALRIQGDSFYGRNNFDEVEMEWSFTPFQKINFNINDVVSKLSDSNIVGKGCSGVVYRVETSTKQIIAVKKLWPIKNEEPPERDFFTAEVQTLGSIRHKNIVRLLGCCNNGRTRLLLFDYICNGSLFGLLHEKRLFLDWDARYKIILGTAHGLEYLHHDCIPPIVHRDVKANNILVGPQFEAFLADFGLAKLVISSDCSRASHVVAGSYGYIAPEYGYSSRITEKSDVYSYGVVLLEMLTGMEPTDNRIPESAHIVTWVISEIREKKREFTSILDQQLLLQCGTRTQEMLQVLGVALLCVNPSPEERPTMKDVTAMLKEISHENDDMDKPNLLHNKGMVTNPKAAVHCSSFSRSCELLIESSSSSS 1093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02914 1093 ProSitePatterns Serine/Threonine protein kinases active-site signature. 891 903 IPR008271 GO:0004672|GO:0006468
Vivi3g02914 1093 ProSiteProfiles Leucine-rich repeat profile. 579 601 IPR001611 GO:0005515
Vivi3g02914 1093 SMART LRR_typ_2 144 168 IPR003591 -
Vivi3g02914 1093 SMART LRR_typ_2 337 361 IPR003591 -
Vivi3g02914 1093 SMART LRR_typ_2 626 646 IPR003591 -
Vivi3g02914 1093 SMART LRR_typ_2 553 577 IPR003591 -
Vivi3g02914 1093 SMART LRR_typ_2 289 313 IPR003591 -
Vivi3g02914 1093 SMART LRR_typ_2 433 457 IPR003591 -
Vivi3g02914 1093 SMART LRR_typ_2 649 682 IPR003591 -
Vivi3g02914 1093 SMART LRR_typ_2 601 625 IPR003591 -
Vivi3g02914 1093 SMART LRR_typ_2 529 552 IPR003591 -
Vivi3g02914 1093 SMART LRR_typ_2 481 505 IPR003591 -
Vivi3g02914 1093 SMART LRR_sd22_2 626 651 - -
Vivi3g02914 1093 SMART LRR_sd22_2 120 143 - -
Vivi3g02914 1093 SMART LRR_sd22_2 481 500 - -
Vivi3g02914 1093 SMART LRR_sd22_2 577 596 - -
Vivi3g02914 1093 SMART LRR_sd22_2 529 550 - -
Vivi3g02914 1093 Pfam Leucine rich repeat N-terminal domain 25 69 IPR013210 -
Vivi3g02914 1093 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 745 847 - -
Vivi3g02914 1093 Pfam Leucine Rich Repeat 122 144 IPR001611 GO:0005515
Vivi3g02914 1093 Pfam Leucine Rich Repeat 411 433 IPR001611 GO:0005515
Vivi3g02914 1093 Gene3D Ribonuclease Inhibitor 23 203 IPR032675 -
Vivi3g02914 1093 SMART serkin_6 769 1048 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g02914 1093 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 435 1045 - -
Vivi3g02914 1093 Gene3D Ribonuclease Inhibitor 204 267 IPR032675 -
Vivi3g02914 1093 ProSiteProfiles Leucine-rich repeat profile. 531 554 IPR001611 GO:0005515
Vivi3g02914 1093 Pfam Protein kinase domain 772 1041 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g02914 1093 ProSiteProfiles Protein kinase domain profile. 769 1052 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g02914 1093 Gene3D Phosphorylase Kinase; domain 1 740 847 - -
Vivi3g02914 1093 PRINTS Leucine-rich repeat signature 532 545 - -
Vivi3g02914 1093 PRINTS Leucine-rich repeat signature 626 639 - -
Vivi3g02914 1093 Gene3D Transferase(Phosphotransferase) domain 1 848 1067 - -
Vivi3g02914 1093 SUPERFAMILY Protein kinase-like (PK-like) 754 1044 IPR011009 -
Vivi3g02914 1093 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 204 329 - -
Vivi3g02914 1093 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 24 203 - -
Vivi3g02914 1093 SUPERFAMILY L domain-like 68 399 - -
Vivi3g02914 1093 Gene3D Ribonuclease Inhibitor 268 432 IPR032675 -
Vivi3g02914 1093 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 411 696 - -
Vivi3g02914 1093 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 848 1062 - -
Vivi3g02914 1093 SUPERFAMILY RNI-like 330 667 - -
Vivi3g02914 1093 Pfam Leucine rich repeat 507 566 IPR001611 GO:0005515
Vivi3g02914 1093 Pfam Leucine rich repeat 608 662 IPR001611 GO:0005515
Vivi3g02914 1093 Pfam Leucine rich repeat 147 204 IPR001611 GO:0005515
Vivi3g02914 1093 Gene3D Ribonuclease Inhibitor 433 698 IPR032675 -
Vivi3g02914 1093 ProSitePatterns Protein kinases ATP-binding region signature. 775 803 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02914 Vivi-Chr3 48644394 48648696 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02914 23 1083 Receptor kinase-like Gene Family AT5G56040 46.090 0.0 906
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Vivi3g02914 Pkinase 4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02914 - - gmx:100807225 1737.24