Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02902 ATGGACAAGAAGTTATCTCTCTTGTTCATGTTTTCACTAGTGTTTGTTAGTGTTGGAGCTGAACCAGTGGAAGATAAACAAGCTTTACTTGATTTTCTTCATAATATGAGTCATTCTCCACATGTCAATTGGGATGAGAATTCTTCTGTATGCCAAACCTGGAGAGGAGTTACCTGCAACGCCGACCGAACTCGAGTTATCGCGATTCGGTTACCTGGAGCTGGATTAAGAGGTCCAATTCCGCCGAACACGCTCAGTCGCCTCGCGGCGATTGAGACAGTGAGTCTTAGATCAAATGGTATCACTGGTTTTTTCCCTGATGGATTCTCTGAGCTGAAAAACTTGACTAGTCTTTATCTTCAGTCTAACAAATTTTCTGGACCATTGCCTTTGGATTTTTCTGTTTGGAATAATCTTACTGTTGTCAATTTGTCCAACAACTTTTTCAATGGTAGCATCCCTTTTTCAGTTTCAAATCTGACTCATCTCAGTTCATTAGTCCTTGCAAACAACTCTCTTTCGGGTGAGATTCCTGATATCGATATTCATAGTCTTCGAGAGCTAAATTTAGCAAACAATGACCTTAGTGGTGATGTACCAAAATCACTTCTTAGATTTCCAAGTTGGGCTTTTTCTGGTAACAATCTTACATCGGTTACTAATAGTTCGCATCCTCCGGCTTTGCCTATGCATCCACCTTATACTCTTCCACATAAGAAAACCAAAGGACTAAGTGAAACTGCAATATTGGGAATCATCATCGGTGTTTGCGCACTTGGATTTGCAGTGATTGCAGTTGTTATGATTCTGTGCTGCTATGACTTTGCTGCTGCAGGTGTGAAAGAATCTGTGAAGTCTAAGAAAAAAGAAGTCTCTACGAAAGCAGAAACTTCTGCGAGCCGAGATAAAAACAAGATAGTATTTTTCGAGGATTGCAATCTCGCGTTTGATCTAGAGGATCTTTTGAGAGCTTCTGCTGAGATTCTAGGAAAGGGAACTTTTGGTACAACATATAAAGCTGCTTTAGAGGATGCAAGCACTGTGGTGGTGAAGAGGTTGAAAGAGGTTACTGTTGGGAAAAAGGAGTTTGAACAACACATGGAAGTTGTAGGGAAACTTAAGCATGAAAATGTGGATGCAATAAGAGCTTATTACTATTCAAAGGATGAGAAGTTAGTTGTATTTGATTATTATCAACAAGGAAGTGTTTCTTCCATCTTACATGGTAACCGAGCGGAAGGAAGAGCTTCTCTAGACTGGGATAGCCGATTAAGAATCGCGATTGGAACTGCGAGAGGAATTGCTCACATCCATGTTCAACAAGGAGGGAAACTAGTTCATGGAAACATAAAAGCTTCAAACATCTTCGTCAATTCACAAGGATACGGTTGTGTATCTGACATAGGTTTAGCAACATTGATGAGTTCAGTACCTTCACCAGGGACAAGAGCATCAGGATACCGTGCGCCAGAAGTAACAGACACGCGTAAAGCAATGCATTCGTCTGATGTATACAGTTTTGGTGTCCTGCTACTCGAGCTTCTAACTGGAAAATCGCCTATATATTCGGCTGAAGGCGAACAAATTGTTCACTTGGTTAGATGGGTGAACTCGGTTGTGAGAGAGGAATGGACCGCAGAGGTTTTCGATGTGGAGCTGTTAAGGTATTCGAATATAGAAGAAGAAATGGTGGAGATGCTACAGATAGGGATGGCTTGTGCTGCAAGAATGCCAGATCAGAGACCAAAAATGTCTGAAGTGGTGAGAATGATGGAAGGATTTCGTCCAGAAAATCGACCATCGTCTACCGAATCTAGATCAGAAGTTTCAACTCCAACTGTTTATGCAACTTAA 1854 0.4126 MDKKLSLLFMFSLVFVSVGAEPVEDKQALLDFLHNMSHSPHVNWDENSSVCQTWRGVTCNADRTRVIAIRLPGAGLRGPIPPNTLSRLAAIETVSLRSNGITGFFPDGFSELKNLTSLYLQSNKFSGPLPLDFSVWNNLTVVNLSNNFFNGSIPFSVSNLTHLSSLVLANNSLSGEIPDIDIHSLRELNLANNDLSGDVPKSLLRFPSWAFSGNNLTSVTNSSHPPALPMHPPYTLPHKKTKGLSETAILGIIIGVCALGFAVIAVVMILCCYDFAAAGVKESVKSKKKEVSTKAETSASRDKNKIVFFEDCNLAFDLEDLLRASAEILGKGTFGTTYKAALEDASTVVVKRLKEVTVGKKEFEQHMEVVGKLKHENVDAIRAYYYSKDEKLVVFDYYQQGSVSSILHGNRAEGRASLDWDSRLRIAIGTARGIAHIHVQQGGKLVHGNIKASNIFVNSQGYGCVSDIGLATLMSSVPSPGTRASGYRAPEVTDTRKAMHSSDVYSFGVLLLELLTGKSPIYSAEGEQIVHLVRWVNSVVREEWTAEVFDVELLRYSNIEEEMVEMLQIGMACAARMPDQRPKMSEVVRMMEGFRPENRPSSTESRSEVSTPTVYAT 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02902 617 SUPERFAMILY Protein kinase-like (PK-like) 327 591 IPR011009 -
Vivi3g02902 617 Pfam Leucine rich repeat N-terminal domain 24 60 IPR013210 -
Vivi3g02902 617 MobiDBLite consensus disorder prediction 598 617 - -
Vivi3g02902 617 Pfam Leucine Rich Repeat 184 212 IPR001611 GO:0005515
Vivi3g02902 617 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 398 605 - -
Vivi3g02902 617 FunFam pollen receptor-like kinase 1 292 397 - -
Vivi3g02902 617 PANTHER OS05G0588300 PROTEIN 8 603 - -
Vivi3g02902 617 Gene3D Phosphorylase Kinase; domain 1 287 397 - -
Vivi3g02902 617 MobiDBLite consensus disorder prediction 593 617 - -
Vivi3g02902 617 FunFam Probable inactive receptor kinase RLK902 22 181 - -
Vivi3g02902 617 ProSitePatterns Protein kinases ATP-binding region signature. 329 360 IPR017441 GO:0005524
Vivi3g02902 617 Gene3D Transferase(Phosphotransferase) domain 1 399 614 - -
Vivi3g02902 617 Pfam Leucine rich repeat 80 125 IPR001611 GO:0005515
Vivi3g02902 617 Gene3D Ribonuclease Inhibitor 23 238 IPR032675 -
Vivi3g02902 617 ProSiteProfiles Protein kinase domain profile. 323 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g02902 617 SUPERFAMILY L domain-like 37 218 - -
Vivi3g02902 617 Pfam Protein tyrosine and serine/threonine kinase 327 590 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02902 Vivi-Chr3 48432068 48435213 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02902 14 613 Receptor kinase-like Gene Family AT4G23740 56.210 0.0 682
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Vivi3g02902 PK_Tyr_Ser-Thr 2.2e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02902 - - gmx:100813065 929.472