Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02895 ATGGGAGATTCAAAGAGTTTGATACATGAGTTACTTCAAGGATTGGAGTTAGCAAGAAAGCTTAGAATTTATCTCAACGTATCTTCTTCTTCTTCTTCCGTTCATGAAACACGTGAAGTTTTGATACATAAAATTATATCCACATTCGAAAAGGCTCTTGAAATTGTTAACCGTAAAGGACACGTTAATGTGGCCGAATCATCACAACAGCAACAACAACAACAACAACAACAACACCCTTCTGTCTCAGGAGCACTTGCCATAAGAATGTTGGATTCACCACCTTTAAGCTCTAGTCCACGAAGTGAAGACTCTGATAGAGATTTCAAGAACCGTGATGATCACAATACTCCTAGAAAAAGAAACACTCTACCAATTAGATGGACAAAACAAATTCGAGTTACACCAGGAATAGCAGTGGAAGGTCCTCTTGATGATGGATATAGTTGGAGAAAATATGGCCAAAAAGACATTCTTGGAGCCACACACCCTAGAGGTTATTACAGATGCACTCACAGAAACATTCAAGGTTGTTTGGCAACAAAGCAAGTACAAAGATCCGACGAAGATCCAACCATCTTCGAAATCACTTACAAAGGAAACCACACATGCACAAACGGAAGCACTTCCAATGTGACTGTTCCAATTCCAACCATGAACCCAAATGAATATCAAGAAACAAATGTAAACACAAACCAACAACTAACGAACCTGCGAACAGGTCTAAGAGTCCAGACAGAGAATCTAGATTTCCTCGACCAACCATTTGCTCCACTAATCCATTTCCATTCAAGCCACGTACTTGAAAGTAGCTTTGCTGAAAACTTCAACTCTCCTGCAACTTCTGGAATGAGTCACTTCTCGATGTCGCCGCCGAGTGTGTTCCCGAATATGGCGAGTGAGATTGTTCCATCAGCTACTTCTGTTGCAAATACGCCAACCACTGATTTAGATTTTCCGTTTCAACAGTTTCAATTCGACGGAGAGAACTTCACATTCGATAACTCGCAGTTTTTCCCTTGA 1023 0.4066 MGDSKSLIHELLQGLELARKLRIYLNVSSSSSSVHETREVLIHKIISTFEKALEIVNRKGHVNVAESSQQQQQQQQQQHPSVSGALAIRMLDSPPLSSSPRSEDSDRDFKNRDDHNTPRKRNTLPIRWTKQIRVTPGIAVEGPLDDGYSWRKYGQKDILGATHPRGYYRCTHRNIQGCLATKQVQRSDEDPTIFEITYKGNHTCTNGSTSNVTVPIPTMNPNEYQETNVNTNQQLTNLRTGLRVQTENLDFLDQPFAPLIHFHSSHVLESSFAENFNSPATSGMSHFSMSPPSVFPNMASEIVPSATSVANTPTTDLDFPFQQFQFDGENFTFDNSQFFP 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02895 340 FunFam WRKY transcription factor 53 130 207 - -
Vivi3g02895 340 Gene3D WRKY domain 137 206 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi3g02895 340 MobiDBLite consensus disorder prediction 101 121 - -
Vivi3g02895 340 ProSiteProfiles WRKY domain profile. 139 202 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi3g02895 340 MobiDBLite consensus disorder prediction 92 125 - -
Vivi3g02895 340 Pfam WRKY DNA -binding domain 145 204 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi3g02895 340 SMART WRKY_cls 144 206 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi3g02895 340 SUPERFAMILY WRKY DNA-binding domain 142 205 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi3g02895 340 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 3 316 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02895 Vivi-Chr3 48163096 48164702 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02895 3 250 WRKY Transcription Factor Family AT4G23810 36.264 3.39e-47 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi3g02895 WRKY 2.4e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02895 - - vvo:131622548 587.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02895 3 48163096 48164702 Vivi7g04283 7 111816863 111818898 PCT