Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02882 ATGATGGAGTGCAACAAAGATGAGGCAGTTAGGGCCAAAGAAATAGCAGAGAGGAAATTTTCTGAAAGGGAATATATTGGTGCGAAGAAGTTTGCTATTAAGGCTCAAAGTTTGTATCCTGATTTGGAGGATGTTCCCCAGTTTTTGACTACTATTGACATTTATATATCTGCTGAGAACAAAGTAAGCGGAGAGATGGATTGGTATGGTATACTTGGAGTGAGCCCCTTTGCTGATGAAGAGACTGTTAGAAAGCAGTACAGGAAGTTAGCGCTCACCCTTCATCCTGACAAAAACAAGTCTTTAGGTGCAGAGGGTGCATTTAAACTGGTTTCAGAGGCATGGAGTTTGTTATCAGATAAGACAAAGAGATTAGAATATAACCAGAAGAGGAGTTTGAAAGGCTTCCAACATAATACTCCCAACCGTGGGCATCCATCAGCAGCGCCTAGTTCAAATAGTTATTATCATTTTAAGAAGAATGCATCTTCAAATGTGAGGACTGGGAATAATAATGCGAGGGCGCCTGCAACTTCTGTTCCTCCTCCCCAGAAAAAGGCTGAAACCTTTTGGACTATCTGTAATCGGTGCAGGACACATTATGAATATCTCAGAGTTTATTTGAATCACACCCTTTTATGTCCCAACTGTAATGAAGCTTTTGTGGCTGTAGAGAGGGGTCCTCCTCCCAATGTTTTTAAGCCGTCAAGTTCGCCCTCCTCACATCAGCAGCACCAAAATTCTCGACGTCATCCAGGAACTAATAATTCAAACCATCTGTGGGGTTCCCAGTCCAGAATGGCTGGTTTTGGTAGCACAGATGGATCGTCATCTGTTGCCGCCCAAGCTGCAAGTGTTGTGCAGAAGGCAAGTGAGAAAGTGAAGAGAGAAGGAGCACCGTCAATTGCTGAATGGGAGAGGATTCAAATGTCTAAGAGGGCTGATGGTTCTATGAAGAAAAGGAGGACAGATGATATGCGCACTAATGGTTATCCAGGATATATGGCAAATCATATGGCTATGGGACATGGAGCAGCAGGCTTGGGCAGTTTCTCTGAATCAGGAAAGGTTAACATGGAAAAAGAAAGGATTTATGGTTTTTCAGGTCTTTCAAGCAAGCATAATAGCACGCGAGAGTTGTCAATGTTTGAGTTACGAAACATGTTGGTAAATAAGGCACGGAATGAAATTCGTAAGAAACTTGAAGAATGGAAGTTAAGGGCTGAAGCTAAGATTATCAACAAGAACAAAGAGAATAAGAGACACAAAAATATGCTTAATGACAAAACAACTGGTTCAGAGAATTATAAAGAGTCCAATGTTAATGGTAATAAGCATGTTGGTATTGGTTCTTTACCCGCCACATCTGATGATACAGTTAAGAGCCAAGCCTATGTTACAATCAATGTTCCGGATCCTGATTTTCACAATTTTGACTTGGATAGAGCTGAAAGTTCCTTTGCAGAGGATCAGGTCTGGGCTGCTTATGATGACGATGATGGAATGCCTAGATATTATGCTAGAATTCACAAGGTGATCTCCATTAAACCATTTAGAATGCGAATCAGTTGGCTTAACTCTCGAAACAACACTGAATTGGGCCCAATAGATTGGGTAGGTTCTGGTTTTTATAAAACTTGTGGGGATTTCAGGACTGGAAAGCATGAAGTAACTGAATCATTAAATTCATTTTCACACAAGGTTAGGTGGACAAAAGGCAACAGAGGAGTTGTGCGCATCTTTCCAGGTAGGGGAGAAGTCTGGGCACTTTATAGAAACTGGTCACCTGATTGGAATGAACATACTCCTGATGAAGTGATACATAAGTATGACATGGTAGAGGTGCTTGATGATTTCAGTGAAGAGCAAGGTATATCAGTCACTCCCCTTGTTAAGTTTCCTGGCTTTAGGACAGTATTTCGAAGGCACCAGGACCAGAATGAGGTTAAGAGGATTCCTAAAGAGGAGATGTTCCGATTCTCTCATCAGGTTCCTAATCACTTGCTTAGTGGGCAAGAAGCTCATAATGCTCCAATAGGCTGTCGAGAGTTGGATCCAGCAGCTACTCCTTTAGATCTCCTTCAGATAGACACGGAAGCTAACGAGACAGCAGGTAATGTTAAGAAAGCCTGA 2133 0.4191 MMECNKDEAVRAKEIAERKFSEREYIGAKKFAIKAQSLYPDLEDVPQFLTTIDIYISAENKVSGEMDWYGILGVSPFADEETVRKQYRKLALTLHPDKNKSLGAEGAFKLVSEAWSLLSDKTKRLEYNQKRSLKGFQHNTPNRGHPSAAPSSNSYYHFKKNASSNVRTGNNNARAPATSVPPPQKKAETFWTICNRCRTHYEYLRVYLNHTLLCPNCNEAFVAVERGPPPNVFKPSSSPSSHQQHQNSRRHPGTNNSNHLWGSQSRMAGFGSTDGSSSVAAQAASVVQKASEKVKREGAPSIAEWERIQMSKRADGSMKKRRTDDMRTNGYPGYMANHMAMGHGAAGLGSFSESGKVNMEKERIYGFSGLSSKHNSTRELSMFELRNMLVNKARNEIRKKLEEWKLRAEAKIINKNKENKRHKNMLNDKTTGSENYKESNVNGNKHVGIGSLPATSDDTVKSQAYVTINVPDPDFHNFDLDRAESSFAEDQVWAAYDDDDGMPRYYARIHKVISIKPFRMRISWLNSRNNTELGPIDWVGSGFYKTCGDFRTGKHEVTESLNSFSHKVRWTKGNRGVVRIFPGRGEVWALYRNWSPDWNEHTPDEVIHKYDMVEVLDDFSEEQGISVTPLVKFPGFRTVFRRHQDQNEVKRIPKEEMFRFSHQVPNHLLSGQEAHNAPIGCRELDPAATPLDLLQIDTEANETAGNVKKA 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02882 710 MobiDBLite consensus disorder prediction 228 275 - -
Vivi3g02882 710 SUPERFAMILY Chaperone J-domain 59 127 IPR036869 -
Vivi3g02882 710 MobiDBLite consensus disorder prediction 132 184 - -
Vivi3g02882 710 Gene3D DnaJ domain 64 174 IPR036869 -
Vivi3g02882 710 SMART dnaj_3 66 123 IPR001623 -
Vivi3g02882 710 PRINTS DnaJ domain signature 69 87 IPR001623 -
Vivi3g02882 710 PRINTS DnaJ domain signature 103 123 IPR001623 -
Vivi3g02882 710 PRINTS DnaJ domain signature 87 102 IPR001623 -
Vivi3g02882 710 PANTHER BNAC03G44070D PROTEIN 2 690 - -
Vivi3g02882 710 MobiDBLite consensus disorder prediction 132 178 - -
Vivi3g02882 710 CDD DnaJ 67 120 IPR001623 -
Vivi3g02882 710 MobiDBLite consensus disorder prediction 236 275 - -
Vivi3g02882 710 Pfam DnaJ domain 67 128 IPR001623 -
Vivi3g02882 710 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Vivi3g02882 710 ProSitePatterns Nt-dnaJ domain signature. 108 127 IPR018253 -
Vivi3g02882 710 Pfam Domain of unknown function (DUF3444) 467 673 IPR024593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02882 Vivi-Chr3 47885048 47889286 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02882 5 229 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 31.760 6.98e-30 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02882 - - cam:101501612 1241.48