Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02866 ATGGCACTGTGTAGAACTGGGCCATACCCAATTCTGGAGAGTAATAGCCTAGCTTATTCGCATAGAAATTTGTTTGTTTTACCTGTTCCTCTGCATTTCGCTAGACATAGACAATCATCTAATGAAGGCAAGAGAAAGCACAAAGGAGTATGCAGTTCATCATTACATGGAGCTGCATCTGCTTCTTCCATGGAATCACATGAAGAGGATCTCAGCGCCTTTTCCGTTTGCTTGGAGGAGGAAACTGATCATGTTGTAAGGTTCAAAATGTCGGATTTTAAGGTTTTAGATCATGTTAGCATTGGCCTTGGTGGAAGGGCGGATGAGGTGGTTTTTGAAGGGGAGGTGAAGGATAGTGGTAGCCCTTTGTATAACACACGAGTTATACTTAGACAGCTTTATAGTACCCAAGCTCAACGTCGAGGAAAACGAGCAATAGAGGTGTTGAAGAAGCTGGTTCGCCGTAAACTTTTATATCATTCTTACTCAATGCAAGTTCTTGGGTATATCTCTTTGCCTGCAAGTGGTGATAGTGGTTCATTCATCCTAGTACATGGGTATCATGGTAGTTTTTCTTTGAGACACTGGCTTCAACAGTCAGATTGGCTTCAAACTTTAGAGGCCACTCTTGCATTGGACGAAGAGTCTGTTAGGAAGGTAGGAGAAGACACAACTGGAGGTCCTGCAATTTCTAGGCAATTGCGTCTTATTCGAATGTTGATGAGAGATCTTCTAATTGGAGTAAATTACCTGCATAGTCATGGTCTTGCCCATACAGAGTTGAGGCTGGAAAATGTGCATATAAGCCCAATAGATCGACATATCAAAGTAGGTATTCTGGGAAATGCTGCTGACTTTTGCGAGGATGGTTCAAATAGTGGCTCAATGGAAAACATGGACAGGCGACAAATGATGATTGCATTTGACATGAGATGTGTGGGTTTCATAATGGCAAAAATGGTAATGGGAGAACTTATGGATCCTTTGATCTTTGCAAAGTTCAAATCGTTCCTCACAAAGGGGAATGATCCTTCTTGTTTGCGACAGCTTATGCTGGAAATCCTTGGTAGAAATTCTCCATATGGAAATGCTGGCTTACAAATGCTTGATAGGAACTGGGGTGCTGGTTGGCACCTTTTATCTTTATTGCTTGCAACCAAACCTTCTGAGAGGATAAGTTGTTTGGATGCTCTAAGGCACCCATTCCTTTGTGGGCCAAGATGGCGAGTAGTCCCATCAATGGATATTATCAGATGGGGTCTGGGTTGTACTGCAATGCGTATTAGTGAGGAGTACATTTATCGTCAGCCTCAGCGCAGTAGGCTTGCCCACTTCATTGACTTGTTGGAGATGTTGAATCCTAATCCAAAGCCAAAGAATTGGCTGGAGCTGCTTCCAGGCAAATGGCGTCTATTGTACTGCACTGGGAAGCATGTTGGGCTGACTCTTCGACAACCTACAGTCCGTGTACTAGTTGGAGATTTGCATTTAACTGTTAAAAGAGAATCAATGTTGAAGTCAAACCTTTCCTTCGTCACTGACATTGGATTCAGAGTCATGATTGGTCAGGACTGGCCTCATGACAAAGCTGGTAAAAGAGGAAGAGTGCAGGTGAGCTCTTCATTCACACTAACAGCTGGGAGACGGTTATATCTGAAGCAAGACAATATCTCTGAGAAGCTCTCCTTTGGCCCTTCCGGCAATGAGGAGGCTTTAGCTCAGAAATTTACTAGCAAGAAATGGAGAAAAATAACTCCTTTCAAGGAGTTTCCATCAAGTCTCCCTGCAGCCAAGCTTGCATCTGGTGATCTTGATGTGACAATGAATCTTGACGATCCTTTAAATCAAAACATTGATACAGCAAAAAATGTTCTTCAAGAACTAAGAACACAAATCCCCCCTGAATTATTTGATCTGTCAAAGGTTGTGTGTGGAACTTATGTGGACTCAAGGCTGCTAATTCTTCGAGGGGTTAATGGATCAGCTCTCCTATTTACAAGGTCTTTTGTGGATACTGACAGTTCTAGCTAA 2031 0.4274 MALCRTGPYPILESNSLAYSHRNLFVLPVPLHFARHRQSSNEGKRKHKGVCSSSLHGAASASSMESHEEDLSAFSVCLEEETDHVVRFKMSDFKVLDHVSIGLGGRADEVVFEGEVKDSGSPLYNTRVILRQLYSTQAQRRGKRAIEVLKKLVRRKLLYHSYSMQVLGYISLPASGDSGSFILVHGYHGSFSLRHWLQQSDWLQTLEATLALDEESVRKVGEDTTGGPAISRQLRLIRMLMRDLLIGVNYLHSHGLAHTELRLENVHISPIDRHIKVGILGNAADFCEDGSNSGSMENMDRRQMMIAFDMRCVGFIMAKMVMGELMDPLIFAKFKSFLTKGNDPSCLRQLMLEILGRNSPYGNAGLQMLDRNWGAGWHLLSLLLATKPSERISCLDALRHPFLCGPRWRVVPSMDIIRWGLGCTAMRISEEYIYRQPQRSRLAHFIDLLEMLNPNPKPKNWLELLPGKWRLLYCTGKHVGLTLRQPTVRVLVGDLHLTVKRESMLKSNLSFVTDIGFRVMIGQDWPHDKAGKRGRVQVSSSFTLTAGRRLYLKQDNISEKLSFGPSGNEEALAQKFTSKKWRKITPFKEFPSSLPAAKLASGDLDVTMNLDDPLNQNIDTAKNVLQELRTQIPPELFDLSKVVCGTYVDSRLLILRGVNGSALLFTRSFVDTDSSS 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02866 676 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 401 649 - -
Vivi3g02866 676 Pfam PAP_fibrillin 438 663 IPR006843 -
Vivi3g02866 676 ProSiteProfiles Protein kinase domain profile. 93 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g02866 676 SMART serkin_6 93 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g02866 676 SUPERFAMILY Protein kinase-like (PK-like) 88 415 IPR011009 -
Vivi3g02866 676 Gene3D Transferase(Phosphotransferase) domain 1 229 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02866 Vivi-Chr3 47685401 47691003 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Vivi3g02866 PAP_fibrillin 6.2e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02866 - - gmx:100809306 1090.87