Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02861 ATGTATAGAGAGAATGGTCTTCTTTTCCCATGGCCATATCTAAACAATTGCTCTCAAGAGCTTCATCAGCTTGAAGAGTACTGCAAAACTCAGAAGTTCAATGCTTCAATGAGTGACATTGTTCAGTTTTCTGCGATGTCCGAGTATGATTTTGCAGCTGAAGGAGATTTGTTCAAAGCACCTGAACCAATTATTGAAGAGTCGGAGATTGATCCGGATCTCATGACAGCAGCCATCTCAATGATATCTTGTGACGAAGATATAAAATCCACAGATATTTCTATTCTTCAAAACGAACAGCTTCTCAGCGATGTATTCTACGAATGCAAGAAAGATCTCCTTGAAAAGACAGCTATTGAGTCACCACTTTCTGAGATTCTGGAAATTAAAATTCCTCTACTGAACATCGATGAGAATTCAGTTCAAGAAAACAAGCCACTTCCTGATATTCCATTATTACCAAAGAGCGTCAGCTCGGGGAGTTTAAGTTCGATGGATTGGATGCATGGATCTGCAATGAAACCTGCTTTGTTTGGTGTCCCGGGAATAGATTTTGACGCGGTTTATGGCATGCGAAGATCATTTAGTGAAGGAGATATAAAGACTCTTGGCAACAGTAATAATATGACCACGGTCCAATCTTCCCGAGAGAGGCCCTTTTCTTGCAACAACGAGGAGCGCTTACAAAAGCTCTCTCGATACAGGAACAAGAAGACAAAGAGGAATTTTGGGAGGAAAATCAAGTATGCTTGTAGGAAGGCTCTAGCTGACAGTCAACCAAGAATCCGTGGAAGATTTGCAAAGAATGAAGAATGTGAGGCTAAGAGGGAATGA 834 0.4101 MYRENGLLFPWPYLNNCSQELHQLEEYCKTQKFNASMSDIVQFSAMSEYDFAAEGDLFKAPEPIIEESEIDPDLMTAAISMISCDEDIKSTDISILQNEQLLSDVFYECKKDLLEKTAIESPLSEILEIKIPLLNIDENSVQENKPLPDIPLLPKSVSSGSLSSMDWMHGSAMKPALFGVPGIDFDAVYGMRRSFSEGDIKTLGNSNNMTTVQSSRERPFSCNNEERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKNEECEAKRE 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02861 277 ProSiteProfiles CCT domain profile. 227 269 IPR010402 GO:0005515
Vivi3g02861 277 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 164 271 IPR045281 GO:0009909
Vivi3g02861 277 Pfam CCT motif 227 269 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02861 Vivi-Chr3 47642434 47645775 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02861 204 273 C2C2-CO-like Transcription Factor Family AT5G57660 41.892 3.66e-10 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vivi3g02861 CCT 4.3e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02861 - - gmx:100814332 391.734