Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02815 ATGGGTAAGAAAGGAAGCAACTGGTTCTCATCTGTGAAGAAAGTCTTCAAGTCTTCTTCTAAGGACTCGCCGGTGCCGGAAAACAAGAAAGAAAAGGAAGAGAATTGGCAGAATGAAGCAGCAGAGGAGGTATCTATGGAGCATTTTCCTGCATACAGTTCACCAGATATCACCAATGAAGGAAGTACCACATCAACACCAATGACAGAAGAAAGAAATCATGCTATTGCCTATGCTGTCGCAACAGCAGCAGCAGCTGAGGCTGCAGTGGCAGCTGCTGAAGCAGCTGCTAGAGCTGTGAGATTGGCAGGTTACGGACGTAACTTGAAGGGAGAAAGAGCAGCAATACTCATTCAATCACACTATAGAGGATACCTAGCTCGACGTGCGCTGCGTGCATTGAAAGGATTAGTAAGATTACAAGCACTTGTGAGAGGACATAACGTGCGGAAGCAAGCACAAATGACAATGAGATGCATGCAAGCATTGGTGAGAGTACAAGGAAGAGTAAGAGCTCGCAGACTCCAATTGACTCATGAGAAACATCAGAGAACAGTTGAGGAAGAGCAACATCATCATCCTATGACAAATGTTTGGGATTATAGGCGTCAAAGTAGCCAGAAAATCAAGGAAAAAGCTCTTCCACACACTTTCAACCGTCAGCAACAACAAAAGCAATATTTGCATATAGATCCAAGTGTTGATGATATTGAAAGCTATGTCACTGAACGTGAAAGAGCTCAATTGGATTGGAACTGGTTGGAGCATTGGATGTTATCACAATCACACAATGTTAAGCACTTAGGATTGGGCCCAGTTGAGACCCCACCATATACAACCACCACAGATGATATGTCTGAGGAAAAGACAGTTGAAATGGACATGATGGGCCTACTGAACCAAGAATATCATGATTTAAGCCCAATCTCTAAATACCACCAAAGACAGCACAGTGTGCCAAGCTATATGGCCCCAACCTTATCTGCAAAGGCCAAGATTAGGACTCAAGGCCCATCAAAGCATCGGGCTTCGTATGGGTCGTACTGGAGCTCATCAACAAGGAGTCCTACAATTGGGCTGGGCTATGACTCGTCGGGCTCTAGCGGGGCCACGGCTGCTCATGTGATAACAAGAAGCCCAAGCCCAAAAATGAATGGGATTCGTCTTCAATCTAGACGGATTTCGGGTGGTGACGATTGGCCCATCCCTCCTGGAGGTCATGGCTGGACAAGATTTGATTGA 1242 0.4565 MGKKGSNWFSSVKKVFKSSSKDSPVPENKKEKEENWQNEAAEEVSMEHFPAYSSPDITNEGSTTSTPMTEERNHAIAYAVATAAAAEAAVAAAEAAARAVRLAGYGRNLKGERAAILIQSHYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMQALVRVQGRVRARRLQLTHEKHQRTVEEEQHHHPMTNVWDYRRQSSQKIKEKALPHTFNRQQQQKQYLHIDPSVDDIESYVTERERAQLDWNWLEHWMLSQSHNVKHLGLGPVETPPYTTTTDDMSEEKTVEMDMMGLLNQEYHDLSPISKYHQRQHSVPSYMAPTLSAKAKIRTQGPSKHRASYGSYWSSSTRSPTIGLGYDSSGSSGATAAHVITRSPSPKMNGIRLQSRRISGGDDWPIPPGGHGWTRFD 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02815 413 MobiDBLite consensus disorder prediction 15 67 - -
Vivi3g02815 413 Pfam IQ calmodulin-binding motif 138 153 IPR000048 GO:0005515
Vivi3g02815 413 Pfam IQ calmodulin-binding motif 112 132 IPR000048 GO:0005515
Vivi3g02815 413 SMART iq_5 133 154 IPR000048 GO:0005515
Vivi3g02815 413 SMART iq_5 110 132 IPR000048 GO:0005515
Vivi3g02815 413 Gene3D - 109 163 - -
Vivi3g02815 413 MobiDBLite consensus disorder prediction 393 413 - -
Vivi3g02815 413 ProSiteProfiles IQ motif profile. 112 139 IPR000048 GO:0005515
Vivi3g02815 413 MobiDBLite consensus disorder prediction 23 41 - -
Vivi3g02815 413 PANTHER IQ-DOMAIN 5-RELATED 1 356 - -
Vivi3g02815 413 ProSiteProfiles IQ motif profile. 135 162 IPR000048 GO:0005515
Vivi3g02815 413 Pfam Protein of unknown function (DUF4005) 301 344 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02815 Vivi-Chr3 47155863 47159130 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02815 1 383 IQD Protein Family AT3G49260 46.667 7.92e-88 273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02815 3 47155863 47159130 Vivi3g02815 3 47155863 47159130 ECH