Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02803 ATGGACTTCTACACCGAACATGAATTTGCTCAAGCTTCCAACTGGTATTGCAACACTCAACCATTACAAGACGACACTGACAAAATCACTGAGTTTTCGCCATTTGAGGGTTTCCCTGAGTTTGCTTGGGAAAGTGAGGTATCATATCAAAGCAATCACATTTACATCAACGAGTTCAAGGATCTTGAAAACTTCAACTTCGATTTCAACCTTCCACTCTTTCATGAAAATTTTGAGGTTAACAACCAAAACCCTCTCAATGTTGTCTTTCCTGCATTGGAACATTGCAATGACAAAGCTGAGAGTACTGGCGAGTGTAGTTTTGCTGAATCTTCCGTGAAAATGGGAAATGGGTTTTCGAGGTTTGTGAAGAAAGAGGAGGAATATGTGTATCAAGAACAGAGTCCATCGCCATTGCCATTGTCAAGTAGTAGTACTAGTTTTGTTAGGAGTAAGAAGTCTTGTTTGCAATATGATGAGATTAAGAAACATTTTGATGTTCCTATAACACTAGCTGCTAAGAGATTGAACGTTGGGTTGACCGTTTTGAAGAAGAGGTGCAGAGAGCTCAATATCACAAGGTGGCCACACAGAAAATTGAAGAGTTTGATGTTACTCATGGACAACCTTAAGGAAATGGGATTGGACAACGAGGTTGCTAGGTTGGAGAAGCAGAAAAAGTTGTTTGAGACAATTCCTGGTATGGAATTGACTGAGGAAACCAAGAAACTGAGACAGGCTTGTTTCAAAAACTGTTACAAGAAGAGAAGATTACTTAAATTCCAACGTTGA 792 0.3952 MDFYTEHEFAQASNWYCNTQPLQDDTDKITEFSPFEGFPEFAWESEVSYQSNHIYINEFKDLENFNFDFNLPLFHENFEVNNQNPLNVVFPALEHCNDKAESTGECSFAESSVKMGNGFSRFVKKEEEYVYQEQSPSPLPLSSSSTSFVRSKKSCLQYDEIKKHFDVPITLAAKRLNVGLTVLKKRCRELNITRWPHRKLKSLMLLMDNLKEMGLDNEVARLEKQKKLFETIPGMELTEETKKLRQACFKNCYKKRRLLKFQR 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02803 263 ProSiteProfiles RWP-RK domain profile. 139 225 IPR003035 -
Vivi3g02803 263 PANTHER PROTEIN RKD4 155 260 IPR044607 GO:0003700
Vivi3g02803 263 Pfam RWP-RK domain 156 203 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02803 Vivi-Chr3 46885915 46887575 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02803 156 259 AtRKD Transcription Factor Family AT5G53040 62.500 5.40e-36 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Vivi3g02803 RWP-RK 8.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02803 - - psat:127081861 421.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02803 3 46885915 46887575 Vivi3g02803 3 46885915 46887575 ECH