Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02756 ATGAAGGGTTCATCAGAACGAAAGTACATGCAAGAGTTTCTCCTATACGCCGCAAGCGCCGCGTTGAGTTGTTTGGTAATATTCACAGGTCTCCATTACTTAGACCCCAACCGTGAATCTTCCAAGAAAGCTCTCGAACACAAGAAAGCCATTGCGAGACGTCTAGGTCGTCCCCTCATTCACACAGATCAATATGAGGATATAATAGCAGGCGATGTTATAAATCCTGACCACATTGATGTAGAGTTTGACTCCATTGGGGGACTGGAATCTATTAAAGAAACTTTGTTTGAGCTTGTTATTCTACCCTTAAAACGCCCTGAGTTGTTTTCGCATGGCAAGCTCCTTGGACCATTAAAGGGGGTTCTGTTGTATGGACCTCCCGGCACTGGGAAAACCATGCTTGCCAAAGCTATTGCCAGGGAGTCCGGAGCGGTTTTTATTAATGTGAGGATATCCAACCTCATGAGCAAATGGTTCGGAGATGCCTCAAAGCTTGTGGTTGCTGTATTTAGTTTGGCTTATAAGCTTCAGCCTGCCATCATATTCATTGATGAAGTAGACAGTTTTTTGGGTCAGCGTCGTCAATCAGATCACGAGGCTTTGTTAAACATGAAAACTGAGTTCATGGCTCTATGGGATGGATTCACTACCAACCAGAATGCCCGAATTATGGTACTTGCGGCAACTAATCGTCCTTCGGAACTTGATGAAGCAATACTTCGGCGCTTTCCTCAATCCTTTGAAATTGGACTTCCTGACCAGAAGGAAAGGGCTGATATATTGAAAATCATCTTAAAGGGTGAGAGGATTGAAGATAACATAGACCTCGATTATATAGCTAGCTTATGCGAGGGTTACACTGGTTCAGATCTATTTGATCTTTGTCAGAAGGCCGCCTATTTTCCTATTAGAGAACTCCTGGAATATGAGAAGAAAGGGAAACAATCTCCTGCACCTAGACGATTGTCACAGGTAGATTTGGAAAAGGCCCTCTCCACTACCCGGACGATGGTTGCTGCAAACGAATACGATGGATTGAACCAACAGTCATCATCAAGACGGACATTTCCTGTTGATTCAGAGTAG 1089 0.4399 MKGSSERKYMQEFLLYAASAALSCLVIFTGLHYLDPNRESSKKALEHKKAIARRLGRPLIHTDQYEDIIAGDVINPDHIDVEFDSIGGLESIKETLFELVILPLKRPELFSHGKLLGPLKGVLLYGPPGTGKTMLAKAIARESGAVFINVRISNLMSKWFGDASKLVVAVFSLAYKLQPAIIFIDEVDSFLGQRRQSDHEALLNMKTEFMALWDGFTTNQNARIMVLAATNRPSELDEAILRRFPQSFEIGLPDQKERADILKIILKGERIEDNIDLDYIASLCEGYTGSDLFDLCQKAAYFPIRELLEYEKKGKQSPAPRRLSQVDLEKALSTTRTMVAANEYDGLNQQSSSRRTFPVDSE 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02756 362 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 10 343 - -
Vivi3g02756 362 ProSitePatterns AAA-protein family signature. 224 243 IPR003960 GO:0005524|GO:0016887
Vivi3g02756 362 MobiDBLite consensus disorder prediction 343 362 - -
Vivi3g02756 362 Gene3D - 80 345 IPR027417 -
Vivi3g02756 362 Gene3D - 253 335 - -
Vivi3g02756 362 Pfam ATPase family associated with various cellular activities (AAA) 122 251 IPR003959 GO:0005524|GO:0016887
Vivi3g02756 362 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Vivi3g02756 362 Pfam AAA+ lid domain 274 309 IPR041569 -
Vivi3g02756 362 FunFam ATPase family AAA domain-containing protein 1 80 257 - -
Vivi3g02756 362 SMART AAA_5 118 254 IPR003593 GO:0016887
Vivi3g02756 362 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 81 345 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02756 Vivi-Chr3 46261840 46267386 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02756 32 318 Calmodulin-binding Proteins AT3G56690 32.646 2.18e-38 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02756 K22530 - gmx:100796908 575.089