Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02755 ATGAAGGGTTCATCAGAACGAAAGTACATGCAAGAGTTTCTCCTATACGCCGCAAGCGCCGCGTTGAGTTGTTTGGTAATATTCACAGGTCTCCATTACTTAGACCCCAACCGTGAATCTTCCAAGAAAGCTCTCGAACACAAGAAAGCCATTGCGAGACGTCTAGGTCGTCCCCTCATTCACACAGATCAATATGAGGATATAATAGCAGGCGATGTTATAAATCCTGACCACATTGATGTAGAGTTTGACTCCATTGGGGGACTGGAATCTATTAAAGAAACTTTGTTTGAGCTTGTTATTCTACCCTTAAAACGCCCTGAGTTGTTTTCGCATGGCAAGCTCCTTGGACCATTAAAGGGGGTTCTGTTGTATGGACCTCCCGGCACTGGGAAAACCATGCTTGCCAAAGCTATTGCCAGGGAGTCCGGAGCGGTTTTTATTAATGTGAGGATATCCAACCTCATGAGCAAATGGTTCGGAGATGCCTCAAAGCTTGTGGTTGCTGTATTTAGTTTGGCTTATAAGCTTCAGCCTGCCATCATATTCATTGATGAAGTAGACAGTTTTTTGGGTCAGCGTCGTCAATCAGATCACGAGGCTTTGTTAAACATGAAAACTGAGTTCATGGCTCTATGGGATGGATTCACTACCAACCAGAATGCCCGAATTATGGTACTTGCGGCAACTAATCGTCCTTCGGAACTTGATGAAGCAATACTTCGGCGCTTTCCTCAATCCTTTGAAATTGGACTTCCTGACCAGAAGGAAAGGGCTGATATATTGAAAATCATCTTAAAGGGTGAGAGGATTGAAGATAACATAGACCTCGATTATATAGCTAGCTTATGCGAGGGTTACACTGGTTCAGATCTATTTGATCTTTGTCAGAAGGCCGCCTATTTTCCTATTAGAGAACTCCTGGAATATGAGAAGAAAGGGAAACAATCTCCTGCACCTAGACGATTGTCACAGGTAGATTTGGAAAAGGCCCTCTCCACTACCCGGACGATGGTTGCTGCAAACGAATACGATGGATTGAACCAACAGTCATCATCAAGACGGACATTTCCTGTTGATTCAGGTGATTATCAAGCTGCAATCAATGAATTATATAAAGTTATAATTTCTCGTATGATTAGCCAACCAGATTCCCAGGATCCTTAA 1167 0.4319 MKGSSERKYMQEFLLYAASAALSCLVIFTGLHYLDPNRESSKKALEHKKAIARRLGRPLIHTDQYEDIIAGDVINPDHIDVEFDSIGGLESIKETLFELVILPLKRPELFSHGKLLGPLKGVLLYGPPGTGKTMLAKAIARESGAVFINVRISNLMSKWFGDASKLVVAVFSLAYKLQPAIIFIDEVDSFLGQRRQSDHEALLNMKTEFMALWDGFTTNQNARIMVLAATNRPSELDEAILRRFPQSFEIGLPDQKERADILKIILKGERIEDNIDLDYIASLCEGYTGSDLFDLCQKAAYFPIRELLEYEKKGKQSPAPRRLSQVDLEKALSTTRTMVAANEYDGLNQQSSSRRTFPVDSGDYQAAINELYKVIISRMISQPDSQDP 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02755 388 Pfam ATPase family associated with various cellular activities (AAA) 122 251 IPR003959 GO:0005524|GO:0016887
Vivi3g02755 388 ProSitePatterns AAA-protein family signature. 224 243 IPR003960 GO:0005524|GO:0016887
Vivi3g02755 388 Gene3D - 253 335 - -
Vivi3g02755 388 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Vivi3g02755 388 FunFam ATPase family AAA domain-containing protein 1 80 257 - -
Vivi3g02755 388 Gene3D - 80 344 IPR027417 -
Vivi3g02755 388 SMART AAA_5 118 254 IPR003593 GO:0016887
Vivi3g02755 388 Pfam AAA+ lid domain 274 309 IPR041569 -
Vivi3g02755 388 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 81 345 IPR027417 -
Vivi3g02755 388 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 10 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02755 Vivi-Chr3 46261838 46267115 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02755 32 318 Calmodulin-binding Proteins AT3G56690 32.646 3.64e-38 144