Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02736 ATGGCGCTAGCAACACTCCCTCTATTCTCTTATCCTCCGTGCCATTGCTCTTCTTCTATAACAACCTTTCTTCCTTCACATTCTCGTCATCTTCCAACCCAACCCTTCATCTCCCCACTCACCAAATCACAACCACCAAACAGCAACTATTTCCTTTCCCAATCTCGACTCTCCACCCACTGCCGCTGCACTTCCCACACGCCCAATCTCGACTTTCAAGACGTCAGACTTGTCACTTTGTTTCAAGAAATCGGTATCAGCTTTGAGGAAGCCAATTTGCTCTTGAGCAATGCTTCCGAACTGACCTTGATACGACTAGATTTATTGCGGGATCGCATTCTTTCTTTAAAATCTCTTGGGTTAGGTCGTATGTCCATCAATCTCGTAGTTACAAAGCAATTAAATATGCTAACTTCAAATGAAATTGACCCACTGTTAAACTTTATGAGAAATGAATTGCAAGGACTGGTTGAGGAAGCCAAGGTGAAACTTCTTTTATCGGCTAATGAGCCGAAAGAGTTATCTGATTTTCTTCAGAAGGTTCAATTGCTTATTGACAGTGGAATTGGGGTTGATAAGATTGCACATGTGCTTAACAGAGTGAGTTTGTCAAAGGCAATTTTTCATAAGTCACTGGAAGAAATTGAAAGAGTAATTAGTTTCTTAAAACCATTTGGTGGCGTTGATTTGATTGTGAAGCGCCCTGCAACTCTCAACTATGATTTGGATAGTCAGCTGAAACCAAGATTCAGGGTTCTTACCGAGTTAAGTGGCGGAGATGAGGATAGTGTTGGGAAAATGGTGAATAAGCTCCCTAAGATCTTGAATTCTAGGGCGGAACATCTTGAGGAACATATAGAGTTATTGAGGTCTTTTGCAGAACTTGATGATCAACAAATATTTAAGATAGCGTTGCTGTCTCCAACTATCTTCACTCTTAGTAGAGAGAGGAAACTGCGTCCTAGAATACAATTTCTCAAGGATTGTGGGTTAGACTCGAGCGCTGATATCTTTAAATTCTTTATCAAAGCACCGGTGTTTTTGTGCGTTTCGTTCCGCAATAACCTTGCTCATAAGCTTGTGTTTTTGGTCAAGATTGGGTATGAATATAGGACAAAAGAGTTGGCAATGGCGATCGCGAATTCTACTAGAATAAGCTGTGCGGGTATGCAGAAGATGGCGAGTGTATACTTGAATTACGGGTTGTCGTCTGATGACATTTTTTCTACGAGTGAGAAGCATCCACCGACACTGCAGAGGATTAAGTACTACTCCGACCTTATTTATAAGTAA 1293 0.4122 MALATLPLFSYPPCHCSSSITTFLPSHSRHLPTQPFISPLTKSQPPNSNYFLSQSRLSTHCRCTSHTPNLDFQDVRLVTLFQEIGISFEEANLLLSNASELTLIRLDLLRDRILSLKSLGLGRMSINLVVTKQLNMLTSNEIDPLLNFMRNELQGLVEEAKVKLLLSANEPKELSDFLQKVQLLIDSGIGVDKIAHVLNRVSLSKAIFHKSLEEIERVISFLKPFGGVDLIVKRPATLNYDLDSQLKPRFRVLTELSGGDEDSVGKMVNKLPKILNSRAEHLEEHIELLRSFAELDDQQIFKIALLSPTIFTLSRERKLRPRIQFLKDCGLDSSADIFKFFIKAPVFLCVSFRNNLAHKLVFLVKIGYEYRTKELAMAIANSTRISCAGMQKMASVYLNYGLSSDDIFSTSEKHPPTLQRIKYYSDLIYK 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02736 430 PANTHER CGI-12 PROTEIN-RELATED 260 419 IPR003690 GO:0003690|GO:0006355
Vivi3g02736 430 Gene3D Transcription termination factor 3, mitochondrial 157 320 IPR038538 -
Vivi3g02736 430 SMART mt_12 338 369 IPR003690 GO:0003690|GO:0006355
Vivi3g02736 430 SMART mt_12 301 332 IPR003690 GO:0003690|GO:0006355
Vivi3g02736 430 SMART mt_12 265 296 IPR003690 GO:0003690|GO:0006355
Vivi3g02736 430 SMART mt_12 228 259 IPR003690 GO:0003690|GO:0006355
Vivi3g02736 430 Pfam mTERF 57 255 IPR003690 GO:0003690|GO:0006355
Vivi3g02736 430 Pfam mTERF 229 365 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02736 Vivi-Chr3 45925861 45928116 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vivi3g02736 mTERF 7.5e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02736 - - vvo:131626180 810.831