Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02732 ATGATCCAACATATTTTGCTTCTATGTTTCCTACTTCATAATTTTCGTTTCATCATTTGCATCAACAATAACAACACGGATAAAGATACACTTCTATCTTTCAAATTACAGCTAACTGATCCAAACAGTGCTTTGTCCAGTTGGAGACAAGATTCTAATCATTGTACATGGTATGGAGTCAACTGTTCCAAAGTTGGTGAAAGAGTTCAGTCTCTCAACTTATCAGGACTTAGTCTCTATGGTAAACTACTTTCTGATCTCTCAAACCTCACTTACCTTCATTCACTTGACCTTTCTAAGAACAATTTTCATGGCCAAATTCCTATCCAATTTGCTCACTTCACACTCCTCAATGTCATTCAATTAGCTTTCAACAATCTCTCAGGCTCACTTCCACCACAACTAGGGCAACTTCATAATCTAGTAAGTTTAGACTTTTCTGTCAATAATCTCATAGGTGAAATCCCTTCAACTTTTGGCAATCTCATTTCTCTTAAGAATCTTTCTTTGGCAAGGAACAAGTTTGCAGGTGAGATTCCAGTTGAATTGGGCAATCTCCGTAATCTTTCAAGACTTCAACTCTCAGAAAATAATTTCACTGGCAAGTTTCCTACTTCTATTTTCTTCAACCTCTCTTCCTTAGTTTTCTTATCCCTCACAAAGAACAATCTATCAGGCGAGTTACCGCAAAATTTTGGCCACGCCTTTCCAAACTTAACCACACTTGCTCTTGCAACTAATAGGTTTGAAGGGGTGATTCCAAATTCTATATCCAATTCATCACATCTTCAAATTATTGATCTTGCTAACAATAGATTTCATGGACCAATACCTCTTTTCAACAACCTGAAAAACCTCACTCATTTGACACTAGGTAGTAACTATCTCACTTCGACAACATCATTGAATTTAAAGTTCTTTGATTCGCTTAGAAACTCCAGTCAGTTGCAAATTCTTATGGTCAATGATAACAACTTGACCGGTGAACTTCCAAATTCTGTTGCCTATCTTTCAGGCAATCTACAACAGTTCTGTGTTTCTAATAATCAGCTAAATGGAAGTGTTCCTAAAGGAATGAACAAGTTTCAAAATCTCATATCCTTCTCTTTTGAACAGAATTATTTCACTGGCGAGTTACCATTAGAATTAGGATCACTCAAGAATTTGGAGCAGCTATTGATATACCAAAACAGATTGTCTGGTGAAATTCCTGATATATTTGGCAATTTAACAAATCTGTATATTCTTGCAATAGGAAACAACCAATTCTCAGGTAGAATTCACGCGAGCATTGGAAAATGCAAGAGATTGACTCTTCTTGACTTGGAAATGAATAAGCTTGCCGGTGTCATACCAATGGAGATTTTTCAACTCTCTGGATTGACAACTTTGTACTTACACGGAAACTTTTTGAACGGATCGCTTCCTCTTGAATTCAAGATGGAGCAGTTAGAGACCATGATTGTTTCAGACAACAAGCTGTCGGGGAACATTCCTAAAATCGAAGTAAACGTCTTGAAGACACTTAAGATGGCAAGAAATAATTTTAGTGGCTCAATTCCAAATAGTCTAGGAGATTTAGCATCCCTTGTGACCTTGGATTTATCATCAAACAATCTCACTGGCCCAATTCCCGAGAGTTTAGAAAAGCTTGAGTATATGGTGAGGTTAAATTTGTCTTTCAACAAATTGGAAGGAGAGGTTCCTATGAAAGGTGTTTTTATGAACCTAAGCCAGGTTGATCTCCAAGGTAACAACAGATTATGCGGCCTTAACAATCAAGTTACGCACAAGTTGGGAGTCACTGTGTGTGTTGCGGGTAAGAAAAACAAGAGAAACATTTTACTCCCTATCATACTAGGGATTATAGGTGCGATTGTTTTGTTCGCTTCAATGCTCTATCTGCTGTGGCTGCTAATTTCCTTAAAGAAACATGAGGAGGAGAATAGAAGTTTGTCATCAACTCCTCTTAAGGGTTTGCCTCAAAATATATCCTATGGTGATATTAGGCTTGCTACAAACAATTTTTCTTCCACAAACTTGGTTGGAAAAGGAGGCTTTGGTTCTGTTTACAAGGGTGTGTTCAACACCAGCACTTACGAAAGTCAAACCACCATACTTGCTGTTAAAGTTCTTGACCTGCAACAAAGAAAAGCCTCTCAGAGTTTTAGTGCAGAATGCGAAGCTTTGAAAAACATTAGGCATCGGAATCTTGTCAAGGTGATCACTTCTTGCTCTAGCACTGATTACAAGGGGGATGATTTTAAGGCACTGGTTATGCAATTCATGCCTAATGGTAATCTAGAGATGAATTTATACCCAGAAGATCTCGAGTCAGGATCTTTACTAACCTTGTTGCAAAGGTTGAATATTGCTATTGATGTAGCTTCTGCCATGGACTACTTGCACCATGATTGTGATCCACCAATAGTCCATTGTGATCTTAAACCTGCCAATGTCCTGCTAGATGAAGATATGGTTGCACATGTAGCAGATTTTGGGTTGGCAAGGTTTCTCTCTCAAAATCCATCAGAGAAACATAGCAGCACGCTGGAACTGAAAGGGTCAATTGGCTATATTGCCCCAGAATATGGTTTAGGAGGCAAGGCTTCAACTAGTGGTGATGTCTACAGTTTTGGGATCCTACTACTAGAGATGTTGATAGCCAAAAAACCAACAGATGAAATGTTCAAAGAAGGATTAAACATGAACAATTTTGAGAAGAAATTACTGAATATTGTTGATCAAAGGCTTATTAACCATTATGAATATTCAACACAAAACTTTAGCAGCGATAGTCATAGTGGTGAATCCAGCGACATCAGCTATAGTGATCGTAGCAACACATACAAAGCTGAGGAGTGCATAGCTGCTGCAATGAGAATTGGCTTGTCATGTGTAGCACATCATCCCAAAGATAGGTGGACCATGAGAGAAGCCTTGACAAAATTACATGGAATTAAGCACTTTATTCTAGGCTTGTAA 2985 0.3812 MIQHILLLCFLLHNFRFIICINNNNTDKDTLLSFKLQLTDPNSALSSWRQDSNHCTWYGVNCSKVGERVQSLNLSGLSLYGKLLSDLSNLTYLHSLDLSKNNFHGQIPIQFAHFTLLNVIQLAFNNLSGSLPPQLGQLHNLVSLDFSVNNLIGEIPSTFGNLISLKNLSLARNKFAGEIPVELGNLRNLSRLQLSENNFTGKFPTSIFFNLSSLVFLSLTKNNLSGELPQNFGHAFPNLTTLALATNRFEGVIPNSISNSSHLQIIDLANNRFHGPIPLFNNLKNLTHLTLGSNYLTSTTSLNLKFFDSLRNSSQLQILMVNDNNLTGELPNSVAYLSGNLQQFCVSNNQLNGSVPKGMNKFQNLISFSFEQNYFTGELPLELGSLKNLEQLLIYQNRLSGEIPDIFGNLTNLYILAIGNNQFSGRIHASIGKCKRLTLLDLEMNKLAGVIPMEIFQLSGLTTLYLHGNFLNGSLPLEFKMEQLETMIVSDNKLSGNIPKIEVNVLKTLKMARNNFSGSIPNSLGDLASLVTLDLSSNNLTGPIPESLEKLEYMVRLNLSFNKLEGEVPMKGVFMNLSQVDLQGNNRLCGLNNQVTHKLGVTVCVAGKKNKRNILLPIILGIIGAIVLFASMLYLLWLLISLKKHEEENRSLSSTPLKGLPQNISYGDIRLATNNFSSTNLVGKGGFGSVYKGVFNTSTYESQTTILAVKVLDLQQRKASQSFSAECEALKNIRHRNLVKVITSCSSTDYKGDDFKALVMQFMPNGNLEMNLYPEDLESGSLLTLLQRLNIAIDVASAMDYLHHDCDPPIVHCDLKPANVLLDEDMVAHVADFGLARFLSQNPSEKHSSTLELKGSIGYIAPEYGLGGKASTSGDVYSFGILLLEMLIAKKPTDEMFKEGLNMNNFEKKLLNIVDQRLINHYEYSTQNFSSDSHSGESSDISYSDRSNTYKAEECIAAAMRIGLSCVAHHPKDRWTMREALTKLHGIKHFILGL 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02732 994 Gene3D Ribonuclease Inhibitor 179 280 IPR032675 -
Vivi3g02732 994 Gene3D Ribonuclease Inhibitor 23 178 IPR032675 -
Vivi3g02732 994 SMART serkin_6 676 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g02732 994 SUPERFAMILY L domain-like 339 592 - -
Vivi3g02732 994 SMART LRR_typ_2 283 309 IPR003591 -
Vivi3g02732 994 SMART LRR_typ_2 211 234 IPR003591 -
Vivi3g02732 994 SMART LRR_typ_2 410 434 IPR003591 -
Vivi3g02732 994 SMART LRR_typ_2 527 551 IPR003591 -
Vivi3g02732 994 SMART LRR_typ_2 186 210 IPR003591 -
Vivi3g02732 994 SMART LRR_typ_2 236 259 IPR003591 -
Vivi3g02732 994 SMART LRR_typ_2 458 481 IPR003591 -
Vivi3g02732 994 SMART LRR_typ_2 138 161 IPR003591 -
Vivi3g02732 994 SMART LRR_typ_2 386 409 IPR003591 -
Vivi3g02732 994 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 763 993 - -
Vivi3g02732 994 ProSiteProfiles Protein kinase domain profile. 676 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g02732 994 FunFam LRR receptor-like serine/threonine-protein kinase EFR 647 762 - -
Vivi3g02732 994 PANTHER LEUCINE RICH REPEAT KINASE 2 310 988 - -
Vivi3g02732 994 FunFam Inactive leucine-rich repeat receptor-like protein kinase 311 599 - -
Vivi3g02732 994 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 63 310 - -
Vivi3g02732 994 SUPERFAMILY Protein kinase-like (PK-like) 653 984 IPR011009 -
Vivi3g02732 994 ProSitePatterns Serine/Threonine protein kinases active-site signature. 810 822 IPR008271 GO:0004672|GO:0006468
Vivi3g02732 994 Gene3D Phosphorylase Kinase; domain 1 658 762 - -
Vivi3g02732 994 Pfam Protein tyrosine and serine/threonine kinase 680 899 IPR001245 GO:0004672|GO:0006468
Vivi3g02732 994 Pfam Leucine rich repeat N-terminal domain 24 63 IPR013210 -
Vivi3g02732 994 ProSitePatterns Protein kinases ATP-binding region signature. 682 710 IPR017441 GO:0005524
Vivi3g02732 994 Gene3D Transferase(Phosphotransferase) domain 1 763 990 - -
Vivi3g02732 994 Gene3D Ribonuclease Inhibitor 281 598 IPR032675 -
Vivi3g02732 994 SUPERFAMILY L domain-like 25 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02732 Vivi-Chr3 45832522 45836306 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02732 24 989 Receptor kinase-like Gene Family AT3G47570 41.066 0.0 687
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Vivi3g02732 PK_Tyr_Ser-Thr 2.1e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02732 - - mtr:11428205 1627.84