Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02724 ATGGCGCTAGCAGCACTCCCTCTATTCTCTAATCCTCCATGCCATTGCTCTTCTTCTATAACAACCTTTCTTCCTTCACATTCTCGTCATCTTCCAACCCAACCCTTCATCTCCCCACTCACCAAATCACAACCACCAAACAGCAACTATTTCCTTTCCCAATCTCGTCCCTCCACCCACTGCCGCTGCACTTCCCACACGCCCAATCTCGACTTCCAATACGTCAGACTTGTCACTTTGTTTCAAGAAATCGGTATCAGCTTTGAGAAAACCAATTTGCTCTTGAGCAATGCTTCCGAACTGACCTCGATACAACTAGATTTATTGCGGGATCGCATTCTTTCTTTAAAATCTCTTGGGTTAGGTCGTATGTCCATCAATCACATAGTTATAAAGCAGTTAAATATGCTAACTTCAAATGAAATTGACCCATTGTTAAACTTTTTGAGAAATGAATTGCAAGGACAGGTTGAGAAAGCTAAGGTGAAACGTCTTTTATCGGCTAATGAGCCGAAAGAATTATCTGATTTTCTTCAGAAGGTTCAATTGCTTATTGACAGTGGAATTGGGGTTGATAAGATTGCACATGTGCTTAACAGAGTGAGTTTGTCAAAGGCAATTTGTCATAGGTCAATGGAAGAAATTGAAAGAGTAATTAGTTTCTTAAAACCATTTGGTGGCGTTGATTTGATTGTGAAGCGCCCTTCAACTCTCAACTATGATTTGGATAGTCAGCTGAAACCGAGAATCAGGGTTCTTACTGAGTTAAGTGGCGGAGATGAGGATAGTGTTGGGAAAGTGCTGAATAAGTACCCTAAGATCTTGAATTTTAGGGCGGAACGTCTTGAGGAACATATAGAGTTCTTGAGGTCTTTTGCAGAACTTGATGATCAACAAATATTTAAGATAGTGTTGGTGTATCCAGCTATCTTCTCTAATAGTAGAGAGAGGAAACTGCGTCCTAGAATACAATTTCTCAAGGATTGTGGATTAGACTCGAGCGCTGATATCTTTAAATTCTTTATCAAAGCACCGGTGTTTTTGGGCCTTTCGTTCCGCAATAACCTTGCTTATAAGCTTGTGTTTTTGGTCAAGATTGGATATGAATATAGGACAAAAGAGTTGGCAATGGCGATCGCGGCTTCTACTAGAATAAGCTGTGCGAATATGCAGAAGATGGTGAGTGTATACTTGAATTACGGGTTGTCGTCTGAAGACATTTTTGCTATGAGTAAGAAGCATCCACCGACACTGCAGTGTGATCATGCCTCGTTGGAGAAGAAGATTAAGTATTTGACAGAGGAGATGGATCGTGACATTCAGGAGTTGTTGGATTTTCCTGCATTTCTTGGATACAAGTTAGATGACAGAATTAAGTATAGGTATGAAATAAAGAAGGATTCATGTGAGGGACAAATGTCTGTCAAGAAGCTTTTAACTGTTTCGAATAAGAACTTCGCCGCTCGGCTGAAAAAGGCTTCTGTAAAATCTAAATTGGAATAA 1503 0.4019 MALAALPLFSNPPCHCSSSITTFLPSHSRHLPTQPFISPLTKSQPPNSNYFLSQSRPSTHCRCTSHTPNLDFQYVRLVTLFQEIGISFEKTNLLLSNASELTSIQLDLLRDRILSLKSLGLGRMSINHIVIKQLNMLTSNEIDPLLNFLRNELQGQVEKAKVKRLLSANEPKELSDFLQKVQLLIDSGIGVDKIAHVLNRVSLSKAICHRSMEEIERVISFLKPFGGVDLIVKRPSTLNYDLDSQLKPRIRVLTELSGGDEDSVGKVLNKYPKILNFRAERLEEHIEFLRSFAELDDQQIFKIVLVYPAIFSNSRERKLRPRIQFLKDCGLDSSADIFKFFIKAPVFLGLSFRNNLAYKLVFLVKIGYEYRTKELAMAIAASTRISCANMQKMVSVYLNYGLSSEDIFAMSKKHPPTLQCDHASLEKKIKYLTEEMDRDIQELLDFPAFLGYKLDDRIKYRYEIKKDSCEGQMSVKKLLTVSNKNFAARLKKASVKSKLE 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02724 500 Pfam mTERF 325 487 IPR003690 GO:0003690|GO:0006355
Vivi3g02724 500 Pfam mTERF 75 255 IPR003690 GO:0003690|GO:0006355
Vivi3g02724 500 Pfam mTERF 171 365 IPR003690 GO:0003690|GO:0006355
Vivi3g02724 500 PANTHER CGI-12 PROTEIN-RELATED 74 257 IPR003690 GO:0003690|GO:0006355
Vivi3g02724 500 SMART mt_12 338 369 IPR003690 GO:0003690|GO:0006355
Vivi3g02724 500 SMART mt_12 440 472 IPR003690 GO:0003690|GO:0006355
Vivi3g02724 500 SMART mt_12 301 332 IPR003690 GO:0003690|GO:0006355
Vivi3g02724 500 SMART mt_12 265 296 IPR003690 GO:0003690|GO:0006355
Vivi3g02724 500 SMART mt_12 408 439 IPR003690 GO:0003690|GO:0006355
Vivi3g02724 500 SMART mt_12 228 259 IPR003690 GO:0003690|GO:0006355
Vivi3g02724 500 Gene3D Transcription termination factor 3, mitochondrial 68 257 IPR038538 -
Vivi3g02724 500 Gene3D Transcription termination factor 3, mitochondrial 258 497 IPR038538 -
Vivi3g02724 500 Coils Coil 422 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02724 Vivi-Chr3 45606986 45608734 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vivi3g02724 mTERF 1.2e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02724 - - vvo:131626180 733.791