Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02709 ATGGCGCTAGCAGCACTCCCTCTATTCTCTAATCCTCCATGCCATTGCTCTTCTTCTATAACAACCTTTCTTCCTTCACATTCTCGTCATCTTACAACCCAACCCTTCATCTCCCCACTCACCAAATCACAACCACCAAACAGCAACTATTTCCTTTCCCAATCTCGACTCTCCACCCACTGCCGCTGCACTTCCCACACGCCCAATCTCGATTTCCAATACGTCAGACTTGTCACTTTGTTTCAAGAAATCGGTATCAGCTTTGAGGAAACCAATTTGCTCTTAAGCAATGCTTCCGAACTGACCTCGATACAACTAGATTTATTGCGGGATCGCATTCTTTCTTTAAAATCTCTTGGATTAGGTCGTATGTCCATCAATCACATAGTTACAGAGCAATTGAATGTGCTAACTTCAAATGAAATTGACCCATTGCTAAGCTTTTTGAGAAATGAATTGCAAGGACAGGTTGAGGAAGCTAAGGTGAAACTTCTTTTATTGGCTAATGAGCCAAAAGAATTATCTGATTTTCCTCACAAGGTTCAATTGCTTATTGACAGTGGAATTGGGGTTGATAAGATTGCACATGTGCTTAACAAAGTGAGTTTGTCAAAGGCAATTTGTCATAGGTCAATGGAAGAAATTGAAAGAGTAATTAGTTTCTTAAAACCATTCGGTGGTGTTGATTTGATTGTGAAGAACCCTGCAATTCTCAACTATGATTTGGATAATCAGCTGAAACCGAGAATTAGGGTTCTTACTGAGTTAAGTGGCGGAGATGACGATAGTGTTGGGAAAGTGCTGAATAGGTTTCCTATTATCTTGAATTATACTGTGGAACATGTTGAGGAACATATAGAGTTCTTGAAGTCTTTTGCAGAACTTGATGATCAACAAATATTTACGATAGTGTTGGTGTTTCCAGCTATCTTCACTAATAGTAGAGAGACGAAACTGCGTCCTAGAATACAATTTCTCAAGGATTGTGGATTAGACTCGGGTGATATCTTTAAATTTTTGTTCCGAGCACCGGTGTTTTTGAGCATTTCGTTCCGCAAGAATCTTGCTTCTAAGCTTTTGTTTTTGGTCAAGATTGGGTATGAATATAGGACAAAAGAGTTGGCAATGGCGATTGCGGCTTCTACTAGAACAAGCTGTGGGAATATGCAGAAGGTGGTGAGTTTATTCTTGAATTCTGGGTTGTCGTCCGAAGAAATTTTTGCTATGAGTAAGAAGCATCCACCGATACTGTGGTATAATCACGCCTCTCTAGAGAAGAAGATAAAGTATTTGACAGAGGAGATGGATCGTGACATTAAGGAGTTGCTGGATTTTCCTGCATTTCTTGGATACAAGTTAGATGATAGAATTAAGCATAGGTATGAAATAAAGAAGGATTTATGGGAGGGACAAATATCTCTCAATCAACTTTTAACTGTTTCAAGTAAGAACTTCAAGTGA 1461 0.3922 MALAALPLFSNPPCHCSSSITTFLPSHSRHLTTQPFISPLTKSQPPNSNYFLSQSRLSTHCRCTSHTPNLDFQYVRLVTLFQEIGISFEETNLLLSNASELTSIQLDLLRDRILSLKSLGLGRMSINHIVTEQLNVLTSNEIDPLLSFLRNELQGQVEEAKVKLLLLANEPKELSDFPHKVQLLIDSGIGVDKIAHVLNKVSLSKAICHRSMEEIERVISFLKPFGGVDLIVKNPAILNYDLDNQLKPRIRVLTELSGGDDDSVGKVLNRFPIILNYTVEHVEEHIEFLKSFAELDDQQIFTIVLVFPAIFTNSRETKLRPRIQFLKDCGLDSGDIFKFLFRAPVFLSISFRKNLASKLLFLVKIGYEYRTKELAMAIAASTRTSCGNMQKVVSLFLNSGLSSEEIFAMSKKHPPILWYNHASLEKKIKYLTEEMDRDIKELLDFPAFLGYKLDDRIKHRYEIKKDLWEGQISLNQLLTVSSKNFK 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02709 486 Coils Coil 150 170 - -
Vivi3g02709 486 PANTHER CGI-12 PROTEIN-RELATED 46 257 IPR003690 GO:0003690|GO:0006355
Vivi3g02709 486 SMART mt_12 439 471 IPR003690 GO:0003690|GO:0006355
Vivi3g02709 486 SMART mt_12 265 296 IPR003690 GO:0003690|GO:0006355
Vivi3g02709 486 SMART mt_12 337 368 IPR003690 GO:0003690|GO:0006355
Vivi3g02709 486 SMART mt_12 228 259 IPR003690 GO:0003690|GO:0006355
Vivi3g02709 486 SMART mt_12 301 332 IPR003690 GO:0003690|GO:0006355
Vivi3g02709 486 SMART mt_12 407 438 IPR003690 GO:0003690|GO:0006355
Vivi3g02709 486 Gene3D Transcription termination factor 3, mitochondrial 293 486 IPR038538 -
Vivi3g02709 486 Gene3D Transcription termination factor 3, mitochondrial 57 175 IPR038538 -
Vivi3g02709 486 Pfam mTERF 319 486 IPR003690 GO:0003690|GO:0006355
Vivi3g02709 486 Pfam mTERF 116 364 IPR003690 GO:0003690|GO:0006355
Vivi3g02709 486 Coils Coil 421 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02709 Vivi-Chr3 45189542 45191269 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vivi3g02709 mTERF 8.9e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02709 - - vvo:131626180 679.478