Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02703 ATGGCATTAGCAGCACTCCCTCTATTCTCAAATCCTCCATGCCATTGCTCTTCTTCACATTCCCGTCAACCCTCAACCTTTTCCCCTCATCTTCAAACTCAGCCCTTTATCTTTCCACTCACCAAATCACAACCACCAAACAGCAACTATCTCCTTTTCCAATTTCGGCCCTCCATCCACTGCCGCTGCAGTTCCCACACTCCCAATCTCGACTTCCAATACGTCAGACTTGTCACTTTGTTTCAAGAAATCGGTATCAGCTTTGAGGAAGCCAATTTGCTCTTGAGCAATGCTTCCGAACTGACCTCGATACAACTAGATTTATTGCGGGATCGCATTCTTTCTTTAAAATCTCTTGGGTTAGGTCGTATGTCCATCAATCACATAGTTACAAAGCAATTAAATATGCTAACTTCAAATGAAATTGACCCATTGTTATACTTTTTGAGAAATGAATTGCAAGGACAGGTTAAGGAATCTAAGGTGAAACGTCTTTTATCGGCTAAAGAGCCAAAAGAATTATCTGATTTTCTTCAGAAGGTTCAATTGCTTATTGACAGTGGAATTGGGGTTGATAAGATTGGACATGTGCTTAACAAAGTGAGTTTGTCAAAGGCAATTTGTCATAGGTCAATGGAAGAAATTGAAAGTGTAATTAGTTTCTTAAAACGATTTGGTGGCGTTGATTTGATTGTGAAGCGCCCTTCAACTCTCAACTATGATTTGGATAGTCAGCTGAAACCGAGATTCAGGGTTCTTACTGAGTTAAGTGGCGGAGATGAGGATAGTGTTGGGAAAGTGGTGAATGTGTTCCCTCCGATCATGAATTTAAGGACAGAACGTCTTGAAGAACAAATAGAGTTCTTGAGGTCTTTTGCAGAACTTGATGATCAACAAATATTTAGGATAGTGTTGGTGTATCCATCTCTTTTCAATAGTAGTAGAGAGAGGAAACTGCGTCCTAAATTACAATTTCTCAAGGATTGTGGGTTAGACTCGGGCGATATGTTTAAATTCTTGATCAGAGCGCCAATGTTTTTGGGCATGTCGGTCAATAACCTTATGTTTATGCTTTCGTTTTTGGTCAAGATTGGGTATCGATATAGGACGAAAGAGTTGGCCGTGGTGATCAAGGCTTCTTCTAGAACAAACTGTGAGAATATGCAAAAGGTGGTGAGTTTGTTCTTGAATTTTGGGTTGTCGTCCAAAGAAATTTTTGCTATGTGTAAGAAGCATCCATCGACACTGCAGTATAATCACGCCTCTCTAGAGAAGAAGATGAAGTATTTCACAGAGGAGATGGATCGTGACATTAAGGAGTTGCTGGATTTTCCTGCAATTCTTGGATACAAGTTAGATGACAGATTTAAGCATAGGTATGAAATAAAGACGGACAAATGTCTATCAATCAGCTTTTAG 1419 0.3982 MALAALPLFSNPPCHCSSSHSRQPSTFSPHLQTQPFIFPLTKSQPPNSNYLLFQFRPSIHCRCSSHTPNLDFQYVRLVTLFQEIGISFEEANLLLSNASELTSIQLDLLRDRILSLKSLGLGRMSINHIVTKQLNMLTSNEIDPLLYFLRNELQGQVKESKVKRLLSAKEPKELSDFLQKVQLLIDSGIGVDKIGHVLNKVSLSKAICHRSMEEIESVISFLKRFGGVDLIVKRPSTLNYDLDSQLKPRFRVLTELSGGDEDSVGKVVNVFPPIMNLRTERLEEQIEFLRSFAELDDQQIFRIVLVYPSLFNSSRERKLRPKLQFLKDCGLDSGDMFKFLIRAPMFLGMSVNNLMFMLSFLVKIGYRYRTKELAVVIKASSRTNCENMQKVVSLFLNFGLSSKEIFAMCKKHPSTLQYNHASLEKKMKYFTEEMDRDIKELLDFPAILGYKLDDRFKHRYEIKTDKCLSISF 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02703 472 SMART mt_12 337 367 IPR003690 GO:0003690|GO:0006355
Vivi3g02703 472 SMART mt_12 406 437 IPR003690 GO:0003690|GO:0006355
Vivi3g02703 472 SMART mt_12 265 296 IPR003690 GO:0003690|GO:0006355
Vivi3g02703 472 SMART mt_12 438 469 IPR003690 GO:0003690|GO:0006355
Vivi3g02703 472 SMART mt_12 228 259 IPR003690 GO:0003690|GO:0006355
Vivi3g02703 472 SMART mt_12 301 332 IPR003690 GO:0003690|GO:0006355
Vivi3g02703 472 PANTHER CGI-12 PROTEIN-RELATED 68 256 IPR003690 GO:0003690|GO:0006355
Vivi3g02703 472 Gene3D Transcription termination factor 3, mitochondrial 66 257 IPR038538 -
Vivi3g02703 472 Gene3D Transcription termination factor 3, mitochondrial 258 469 IPR038538 -
Vivi3g02703 472 Pfam mTERF 116 363 IPR003690 GO:0003690|GO:0006355
Vivi3g02703 472 Pfam mTERF 373 461 IPR003690 GO:0003690|GO:0006355
Vivi3g02703 472 Pfam mTERF 76 255 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02703 Vivi-Chr3 45115994 45117839 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vivi3g02703 mTERF 7.9e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02703 - - vvo:131626180 610.142