Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02700 ATGGCGCTAGCAGCACTTCCTCTATTCTCATATCCTCCATACCATTGCTCTTCTTCTATAATAAACCCTTCACATTCCCGTCATCTTCAAACTCAGTCCTTCATCTCCCCACTCACCAAATCACAACCACCAAACAACAACTATCTCCTTTTCCAATTTCGGCCCTCCATCCACTGCCGCTGCACTTCCCACACGCCCAATCTCGACTTCCAATACGTCAGACTTGTCACTTTGTTTCAAGATATCGGTATCAGCTTTGAGGAAGCCAATTTGCTCTTGAGCAATGCTTCCGAACTGACCTCGATACAACTAGATTTATTGCGGGATCGCATTCTTTCTTTAAAATCTCTTGGGTTAGGTCGTATGTCCATCAATCACATAGTTACAAAGCAATTAAATATGCTAACTTCAAATGAAATTGACCCATTGTTAAACTTTTTGAGAAATGAATTGCAAGGACAGGTTAAGGAAGCTAAGGTGAAACGTCTTTTATCGGCTAATGAGCCGAAAGAATTATCTGATTTTCTTCAGAAGGTTCAATTGCTTATTGACAGTGGAATTGGGGTTGATAAGATTGGACATGTGCTTAACAAAGTGAGTTTGTCAAAGGCAATTTTTCATAGGTCAATGGAAGAAATTGAAAGTGTAATTAGTTTCTTAAAACGATTTGGTGGTGTTGATTTGATTGTGAAGCGCCCTGCAACTCTCAACTATGATTTGGATAGTCAGCTGAAGCCGAGATTCAGGGTTCTTACTGAGTTAAGTGGCGGAGATGAGGATAGTGTTGGGAAAATGGTGAATAGGTACCCTCCAATCTTAAATTTTAGGGCAGAACATCTTGAGGAACATATAGTGTTCTTGAGGTCTTTTGCAGAACTTGATGATCAACAAATATTTAGGATAGTGTTGGCGTGTCCATCTATTTTCAGTAGAAGTAGAGAGAGGAAACTGCGTCCTAGATTACAATTTCTCAAGGATTGTGGGTTAGACTCGGGCGATATGTTTAAATTATTGATCAGAGGTCCGATGTTTTTGGCCATTTCGTTCCGCAATAACCTTGAGTGTAAGCTTTCGTTTTTGGTCAAGATTGGGTATGAATATAGGACGAAAGAGTTGGCCGCGGCATTAACGGCTTCTTCTAGAATAAGCTGTGCGAATATGCAGAAGGTGGTGAGTGTATGCTTGAATTACGGGTTGTCGTCTGAAGACATTTTTGCTATGAGTAAGAAACAACCACGGATACTGCAGTGTAATCACGCCTCGTTGGAGAAGAAGATTAAGTATTTGATAGAGGAGATGGATCGTGACATTCAGGAGTTGTTGGATTTTCCTGCATTTCTTGGATACAATTTTGATGACAGAATTAAGTATAGGATGAAGTGGAAATTGAAATGA 1395 0.4014 MALAALPLFSYPPYHCSSSIINPSHSRHLQTQSFISPLTKSQPPNNNYLLFQFRPSIHCRCTSHTPNLDFQYVRLVTLFQDIGISFEEANLLLSNASELTSIQLDLLRDRILSLKSLGLGRMSINHIVTKQLNMLTSNEIDPLLNFLRNELQGQVKEAKVKRLLSANEPKELSDFLQKVQLLIDSGIGVDKIGHVLNKVSLSKAIFHRSMEEIESVISFLKRFGGVDLIVKRPATLNYDLDSQLKPRFRVLTELSGGDEDSVGKMVNRYPPILNFRAEHLEEHIVFLRSFAELDDQQIFRIVLACPSIFSRSRERKLRPRLQFLKDCGLDSGDMFKLLIRGPMFLAISFRNNLECKLSFLVKIGYEYRTKELAAALTASSRISCANMQKVVSVCLNYGLSSEDIFAMSKKQPRILQCNHASLEKKIKYLIEEMDRDIQELLDFPAFLGYNFDDRIKYRMKWKLK 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02700 464 SMART mt_12 405 436 IPR003690 GO:0003690|GO:0006355
Vivi3g02700 464 SMART mt_12 226 257 IPR003690 GO:0003690|GO:0006355
Vivi3g02700 464 SMART mt_12 335 366 IPR003690 GO:0003690|GO:0006355
Vivi3g02700 464 SMART mt_12 263 294 IPR003690 GO:0003690|GO:0006355
Vivi3g02700 464 SMART mt_12 299 330 IPR003690 GO:0003690|GO:0006355
Vivi3g02700 464 Pfam mTERF 227 362 IPR003690 GO:0003690|GO:0006355
Vivi3g02700 464 Pfam mTERF 75 253 IPR003690 GO:0003690|GO:0006355
Vivi3g02700 464 Pfam mTERF 383 460 IPR003690 GO:0003690|GO:0006355
Vivi3g02700 464 PANTHER CGI-12 PROTEIN-RELATED 72 255 IPR003690 GO:0003690|GO:0006355
Vivi3g02700 464 Gene3D Transcription termination factor 3, mitochondrial 279 464 IPR038538 -
Vivi3g02700 464 Gene3D Transcription termination factor 3, mitochondrial 64 255 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02700 Vivi-Chr3 45106932 45110546 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vivi3g02700 mTERF 1.1e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02700 - - vvo:131626180 657.136