Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02693 ATGGGTGAAATTGTGACTAGTGGTGAGAGATTGGTGAGAGTTGAAGAAGAGGAAGAGAGTGGTGAGAGTAGAAGAGGTGGTGAAATGAAAGGGCTTTTGAGATGGGAGAGGTTTTTGCCGAAGATGGTTTTGAGAGTGCTTTTGGTTGAAGCTGATGATTGTACTAGGCAGATTATAACAGCGCTTCTTAGGAAATGCAATTATAAAGTTGCTGCTGTTGCTGATGGATTGAAGGCGTGGGAGATACTTAAGGGAAGACCGCACAATTTCGATCTTATACTTACAGAAGTCGATTTGCCGTCTGTATCTGGCTATGCGCTTCTCTCGTTAATTATGGAGCATGATTCTTGCAAAAGCATCCCTGTTATAATGATGTCGTCGCAAGATTCAGTTAGTACAGTATACAAATGCATGTGTAGAGGTGCAGCTGATTATCTTGTTAAGCCGATTCGGATAAATGAATTAAGGAATTTGTGGCAGCATGTTTGGAGAAGACAATCGCAGTCTACCGCAACCGCTGGCATAAATGGTCCCCAAGATGAAAGTGATGCACAGCAGAAGGTTGAAGCGACTGCTGAAAACAACGCTGCTAGTAATCGTTCTAGTGGCGACGCTGCTTGCATTCAAAGAAATAAGGACTTGATTGAGAAAGGAAGTGATGCACAGAGCTCTTGTACAAAGCCAAACATGGAAACTGAGAGTGGCTTGGTTGATAACATGCAAGAATTTACTCAGCAGAAATGTGCTGAAGCACGTCCAAGTGAAAAAAAGACACAAGAATTTGACATTCGTTTAGGCCAGACATTGATTACGCAGGACAGTCACGTTGGAGGATTAAGCGTGGCTAACTGCAAAAATGGAGAGACAAGCACAAATAATGGCAAGGACGTTGATGATCAAGAGCATTTTAGGATTGCTAGCACCAGTGGTGAGGTTCATGACAATCACTATGTTCAAATTAACTCTACTAAGGAAGCTATTGACTTGATTGGAGCATTTCGTACGCATCCGAATTGCAGTCTCGAAAATTCATCAATTGATTGGACAAACAAGCTTGACAATTCTCCACAATTGGATCTTTCTCTTAGAAGCTCTCATCCAAGTAACATTGAGAAGGAACTTACTGAAGAAAGGAACACCCTTATGCATTCTAATGCTTCCGCTTTCAAACGGTATACTAACAGACAATTGCAAGCGTCACCGGCAGTAGTAGTTAACTTCTCTGATCAACAAAGAGAACAAAAAACAAATAATGATAACCATAACTCAGATAGTTCAGTACCAAGTATGAAAAAATGTAATATATCTCCGGCTACAGCCCAATCAAAAGAATCGGAACTCGCAACCTCACATTCCCAGCAAGGGCATTCTCTCCCAATTCCCGTAAAAAGCGTAAGGTTCAATGATCTTTGTATGGCCTATGGCTCAACACTCCCACAAGGGTTTTGTACACAATCAGGTCCACCATCAATGCCAGGTTCAGTTGTGTTTCTCGAACAGAATTTTCAAGCAGATGCGTTTTATCAGCCAAATAAAGAAAATAATTCAGAACAAGTTTACGAACCCCGTTGTCCGAATGGAAATAGCACCCAAAACCAAATTGTGCACACACAGGAACACAGGTCAGAACACGCAGAGGATCAAAGACTAATCTCCCCAACAACTGATCAAAGTGTATCCAGTAGTTTATGTAATAATGGAAATGCAAGCCATCTTAACAGTATTGGTTATGGAAGTAATTGTGGAAGTAGCAGCAATATTGAAAATGTCGCCGCTTTCAGGACATCAGCAGTTTCCGATGGTAAGAATGAAGACCTCACAAACGGTGGATACTCACTTTCACATCGATCTATGCTAAGAGAAGCAGCTCTAAACAAGTTCCGCTTGAAACGAAAAGAGAGATGTTATGAAAAGAAGGTTCGATATGAGAGCAGGAAGAAACTAGCAGAGCAGCGTCCTCGAGTTAAAGGACAATTCGTTCGCCAAGTGAATCCTGATTCTCTTTCTGGAGATAAAGATTGCTGA 2025 0.4153 MGEIVTSGERLVRVEEEEESGESRRGGEMKGLLRWERFLPKMVLRVLLVEADDCTRQIITALLRKCNYKVAAVADGLKAWEILKGRPHNFDLILTEVDLPSVSGYALLSLIMEHDSCKSIPVIMMSSQDSVSTVYKCMCRGAADYLVKPIRINELRNLWQHVWRRQSQSTATAGINGPQDESDAQQKVEATAENNAASNRSSGDAACIQRNKDLIEKGSDAQSSCTKPNMETESGLVDNMQEFTQQKCAEARPSEKKTQEFDIRLGQTLITQDSHVGGLSVANCKNGETSTNNGKDVDDQEHFRIASTSGEVHDNHYVQINSTKEAIDLIGAFRTHPNCSLENSSIDWTNKLDNSPQLDLSLRSSHPSNIEKELTEERNTLMHSNASAFKRYTNRQLQASPAVVVNFSDQQREQKTNNDNHNSDSSVPSMKKCNISPATAQSKESELATSHSQQGHSLPIPVKSVRFNDLCMAYGSTLPQGFCTQSGPPSMPGSVVFLEQNFQADAFYQPNKENNSEQVYEPRCPNGNSTQNQIVHTQEHRSEHAEDQRLISPTTDQSVSSSLCNNGNASHLNSIGYGSNCGSSSNIENVAAFRTSAVSDGKNEDLTNGGYSLSHRSMLREAALNKFRLKRKERCYEKKVRYESRKKLAEQRPRVKGQFVRQVNPDSLSGDKDC 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02693 674 ProSiteProfiles Response regulatory domain profile. 45 163 IPR001789 GO:0000160
Vivi3g02693 674 MobiDBLite consensus disorder prediction 420 459 - -
Vivi3g02693 674 Pfam CCT motif 620 662 IPR010402 GO:0005515
Vivi3g02693 674 SUPERFAMILY CheY-like 44 170 IPR011006 -
Vivi3g02693 674 CDD psREC_PRR 46 149 - -
Vivi3g02693 674 MobiDBLite consensus disorder prediction 646 674 - -
Vivi3g02693 674 SMART REC_2 44 159 IPR001789 GO:0000160
Vivi3g02693 674 MobiDBLite consensus disorder prediction 525 562 - -
Vivi3g02693 674 MobiDBLite consensus disorder prediction 170 205 - -
Vivi3g02693 674 PANTHER TWO-COMPONENT RESPONSE REGULATOR 44 380 IPR045279 GO:0009736
Vivi3g02693 674 Pfam Response regulator receiver domain 46 157 IPR001789 GO:0000160
Vivi3g02693 674 ProSiteProfiles CCT domain profile. 620 662 IPR010402 GO:0005515
Vivi3g02693 674 Gene3D - 42 266 - -
Vivi3g02693 674 MobiDBLite consensus disorder prediction 408 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02693 Vivi-Chr3 45052107 45055644 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02693 325 663 Response Regulator Gene Family AT5G24470 33.051 9.27e-27 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Vivi3g02693 Response_reg 1.8e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02693 K12130 - gmx:100777119 920.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02693 3 45052107 45055644 Vivi3g02693 3 45052107 45055644 ECH