Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02663 ATGCCTCACATCCCAAGAACTCTTCCAAGGGTTTTGACTGTTCCTAGAATTATTTCTGACCTGGATAATGAATCAAACATTAGTTCTTCTGGATGTCAGGAGCAGAAAATCATTGTGGCAAACATGTTGCCTCTGCAGGCTAAAAGAGATATTGATACTGCTAAATGGTGTTTCAATTGGGATGAAGATTCAATTCTATTACAACTTAAATATGATTTTTCTTCTGATACTGAGGTAATCTATGTGGGTTCTTTCAAAGCTGAGGTAGATGCTAGTGAGCAGGATGAAGTTGCTCAGATATTACTGGATGACTTTAATTGTGTGCCTACCTTTCTACCACATGATCTGCAGAAAAAGTTTTATCTTGGATTTTGTAAGCAGCAGCTCTAG 390 0.3769 MPHIPRTLPRVLTVPRIISDLDNESNISSSGCQEQKIIVANMLPLQAKRDIDTAKWCFNWDEDSILLQLKYDFSSDTEVIYVGSFKAEVDASEQDEVAQILLDDFNCVPTFLPHDLQKKFYLGFCKQQL 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02663 129 Pfam Glycosyltransferase family 20 35 129 IPR001830 GO:0003824|GO:0005992
Vivi3g02663 129 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 10 129 IPR001830 GO:0003824|GO:0005992
Vivi3g02663 129 Gene3D Glycogen Phosphorylase B; 22 129 - -
Vivi3g02663 129 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 36 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02663 Vivi-Chr3 44687878 44688267 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02663 2 129 Trehalose Biosynthesis Gene Families AT1G70290 61.364 1.24e-52 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02663 K16055 - vvo:131661219 266.159