Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02648 ATGGAGGAAGTGTTTTCTTTTGGTATGATTATCAAACTAGCTTCTTCACTTGCTGTTGTGGGTATTTTCAGCTGGATACTTTATGTTTATGGCAATTTGTGGTATAACCTTCAAAGGGTTAGAAGGAAGCTACAAATGCAAGGTATTAGAGGGCCTCCACCTTCTTCTTTTCTACATGGGAATCTACCTGATATGCAGAGAATCAAATCACAAGCTAGCTTATTATCCAAACCAAATTATGATCAGTTTCTAGCTCATGATTATTCTGCAGCACTGTTCCCATTTTTTCAACAGTGGAGGAAACAATACGGTTTAGTGTACACCTACTCGATAGGGATGAAGCAACATTTATATGTAAACGAACCGGATCTCGTGAAGGAAATGAACCAATGTATCACTTTGAGTTTGGGTAAGCCTTCTTATATAACTAACAAACTTTCACCAATGCTTGGTAATGGCATTTTGAGAGCCAATGGTCATAGTTGGGCACAACAGAGAAAACTTGTTGCAGCTGAGTTTTTCATGGACAAAGTTAAGGGTATGGTGGGACTTATGATAGAATCAGCACAGCCATTACTTCTAAAGTGGGAACAAATTATAGAGGAGCAAGGTGGGGGTGCCACTGCTGAAGTTAAAGTTGATGCTGATTTGAGAGGCTTTTCAGCTGATGTTATTTCAAGAGTTTGTTTTGGACATTCTTATTCTAAGGGAAAAGAAGTTTTCTTAAAGCTTAGAAGCATCCAAACGATCATGTCAAACCATGGCTTCCTTTTTGGACAGAGCGGTTTTCTGGAGAAACTGAAATTTTGGACGAAGAAGGAAGATGAGATAAGCAGTTTGGAGAAAGAGATAGAGTCACTGATATGGGAGTTAGTGGAAGAACGGAAGCGAGAATCCTCGTCAGAAAAGGATTTGATGCAGTTACTGCTGGAAGCAGCAATGAGTGATCAAAGTTTGGGGAAGGATTTCTCAAAGCAGTTCATTGTGGATAACTGCAAAAACATATACTTTGCTGGTCATGAAACTACTGCTGTTGCAGCTTCTTGGTGTTTGATGCTTCTTGCTTTATACCCCGAATGGCAAACTCGTATTAGGACCGAGGTGGCTCAACATTGCCCCAATGGCATACCAGATGCAGATTCTCTCCCTCTTTTGAAAACGGTGACTATGGTGATTCAAGAAGTGCTAAGATTATATCCACCAGCAGCCTTTGTATCAAGAGAAGCATTTGAAGATATCCAAATTGGAAACCTAAATGTTCCAAAAGGTGTTTGCTTATGGACACTGATTCCAACTTTGCACAGAGATCCTGAAATTTGGGGACCAGATTCAAATGAGTTTAAACCAGAAAGGTTCAGTGAGGGTGTTTCTAAGGCTATCAAGTTTCCACAAGCGTATGTGCCATTTGGAATAGGCACTAGGTTGTGCGTGGGGAAGAACTTTGCAATGGTTGAACTAAAGGTTGTGCTAGCCCTTATTGTCTCCAAGTTCAGCTTCTCTTTGTCTCCTAGCTATAAGCATTCTCCTGCATACAACATGATTGTTGAGCCAGGACATGGTGTGTATATTCTCATTCAGAAGAACAAGAACTGA 1593 0.4043 MEEVFSFGMIIKLASSLAVVGIFSWILYVYGNLWYNLQRVRRKLQMQGIRGPPPSSFLHGNLPDMQRIKSQASLLSKPNYDQFLAHDYSAALFPFFQQWRKQYGLVYTYSIGMKQHLYVNEPDLVKEMNQCITLSLGKPSYITNKLSPMLGNGILRANGHSWAQQRKLVAAEFFMDKVKGMVGLMIESAQPLLLKWEQIIEEQGGGATAEVKVDADLRGFSADVISRVCFGHSYSKGKEVFLKLRSIQTIMSNHGFLFGQSGFLEKLKFWTKKEDEISSLEKEIESLIWELVEERKRESSSEKDLMQLLLEAAMSDQSLGKDFSKQFIVDNCKNIYFAGHETTAVAASWCLMLLALYPEWQTRIRTEVAQHCPNGIPDADSLPLLKTVTMVIQEVLRLYPPAAFVSREAFEDIQIGNLNVPKGVCLWTLIPTLHRDPEIWGPDSNEFKPERFSEGVSKAIKFPQAYVPFGIGTRLCVGKNFAMVELKVVLALIVSKFSFSLSPSYKHSPAYNMIVEPGHGVYILIQKNKN 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02648 530 Gene3D Cytochrome P450 33 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g02648 530 Pfam Cytochrome P450 89 511 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g02648 530 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 469 478 IPR017972 GO:0005506|GO:0016705
Vivi3g02648 530 PANTHER CYTOCHROME P450 FAMILY MEMBER 31 520 - -
Vivi3g02648 530 Coils Coil 277 297 - -
Vivi3g02648 530 PRINTS E-class P450 group I signature 100 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g02648 530 PRINTS E-class P450 group I signature 347 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g02648 530 PRINTS E-class P450 group I signature 220 238 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g02648 530 PRINTS E-class P450 group I signature 466 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g02648 530 PRINTS E-class P450 group I signature 476 499 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g02648 530 PRINTS E-class P450 group I signature 327 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g02648 530 SUPERFAMILY Cytochrome P450 88 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g02648 530 PRINTS P450 superfamily signature 338 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g02648 530 PRINTS P450 superfamily signature 476 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g02648 530 PRINTS P450 superfamily signature 390 401 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g02648 530 PRINTS P450 superfamily signature 467 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02648 Vivi-Chr3 44464078 44467625 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02648 124 525 Cytochrome P450 AT5G24900 57.946 9.67e-177 502
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02648 K20661 - gmx:100815776 858.596
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02648 3 44464078 44467625 Vivi3g02648 3 44464078 44467625 ECH