Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02643 ATGGAAGCGCTTGTATGCAGAAAATTGGGCGACCCAACGGCCACCGTGGAATCCGATAACAGCTCAATCTTCGTATCCAAGAATCATCCAATCCCTGAATTCAATTCTCCCACATCGGTCAGAGTTAGAATCAAAGCCACAAGCTTGAATTTCGCTAATTATTTGCAGATTCTCGGCAAGTATCAGGAGAAACCACCTTTGCCATTCATTCCCGGATCCGATTTTTCAGGCATCGTTGATTCCGTTGGCTCCAAAGTTACCAATTTCCGTGTTGGAGATCCTGTTTGCTCCTTCGCTGCTCTTGGATCGTATGCTCAGTATATAGTTGTTGATCAGAACGATTTGTTTCGCGTGCCGGAAGGTTGTGATTTGGTTGCCGCTGGAGCACTTGCTGTGGCGTTTGGGACTTCTCATGTTGCACTTGCTCATAGAGCTCAGTTGAAATCTGGTCAGGTATTGTTGGTTTTGGGTGCAGCAGGTGGCGTAGGTCTTGCAGCTGTGCAAATTGGGAAAGCATGTGGAGCCATTGTCATTGCCGTTGCTAGGGGAGCTGAAAAGGTGCAGCTCTTGAAATCACTTGGTGTTGATCATGTGGTGGACTTGGGTAATGAAAATGTCATTGACAGTGTCAAAGAGTTCCTCAAGATCAGAAAGCTTAAAGGGGTTGATGTCCTGTATGACCCAGTTGGAGGCAAGCTTACTAAAGAATCTTTGAAGGTTCTGAAATGGGGAGCTCACATTCTAATAATTGGGTTTGCAAGTGGAGAAGTTCCTGTCATCCCTGCTAACATAGCTCTTGTTAAGAATTGGACAGTACACGGGCTTTATTGGGGTAGTTATAAAATACACCGCCCAGCTGTTCTTGAAGATTCTATCAAGGAGCTACTGTCTTTGTTGGCAAAAGGCTTGATTTCCATTCATATTTCTCATTCTTACAGCTTGTCAGAGGCCAACCTTGCCTTCTCAGCCATCAAAGAAAGGAAAGTTATCGGGAAAGTGATGCTTGTATTTGATGAGAAAACTACAAGATCTAAGCTATGA 1041 0.4457 MEALVCRKLGDPTATVESDNSSIFVSKNHPIPEFNSPTSVRVRIKATSLNFANYLQILGKYQEKPPLPFIPGSDFSGIVDSVGSKVTNFRVGDPVCSFAALGSYAQYIVVDQNDLFRVPEGCDLVAAGALAVAFGTSHVALAHRAQLKSGQVLLVLGAAGGVGLAAVQIGKACGAIVIAVARGAEKVQLLKSLGVDHVVDLGNENVIDSVKEFLKIRKLKGVDVLYDPVGGKLTKESLKVLKWGAHILIIGFASGEVPVIPANIALVKNWTVHGLYWGSYKIHRPAVLEDSIKELLSLLAKGLISIHISHSYSLSEANLAFSAIKERKVIGKVMLVFDEKTTRSKL 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02643 346 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 122 287 IPR036291 -
Vivi3g02643 346 Gene3D - 35 331 - -
Vivi3g02643 346 SMART PKS_ER_names_mod 18 335 IPR020843 GO:0016491
Vivi3g02643 346 SUPERFAMILY GroES-like 22 151 IPR011032 -
Vivi3g02643 346 Pfam Alcohol dehydrogenase GroES-like domain 38 98 IPR013154 -
Vivi3g02643 346 PANTHER SHORT-CHAIN DEHYDROGENASE/REDUCTASE 1 335 - -
Vivi3g02643 346 Pfam Zinc-binding dehydrogenase 161 300 IPR013149 -
Vivi3g02643 346 CDD QOR1 1 335 - -
Vivi3g02643 346 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 150 171 IPR002364 GO:0008270|GO:0016491
Vivi3g02643 346 Gene3D - 133 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02643 Vivi-Chr3 44403516 44407598 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02643 68 266 Monolignol Biosynthesis Gene Families AT1G72680 26.695 5.47e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02643 K00344 - gmx:100817700 565.844