Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02641 ATGAAGGATATTCTTAGTATGGACCTGAAAAGACTAAGTCCCCATGAGACAAGAAAAATTCACTTTTCAAGTCTGGACATGGCTTATGCGTTCTACAACCAGTATGCTAAAATGAACGGGTTTGCAATTTGCAGGAGCAAGATCCTTCGAAGCAAGAAAGGAGAAATATTACAACGGGCATTTGTTTGTCACAGACAGGGTTTTAGGGATTTGATTGAAAACATACCACATGCCATTTTTAAGGATCCATTCAGAAGGGGTAACCATATCTTGGTTATGTGTGATGCATACACTCCTGCTGGAGAACCAATTCCCAGTAACAAAAGACACGCAGCTGCCAAGGTTTTCAGCCATCCTGATGTTGTTGCTGAGGAAACATGGTATGGTATTAAACAAGAATACACCTTGTTGCAGAAAGACATCAATTGGCCTCTTGGTTGGCCAGCTGGTGGTTATCCTGGACCTCATGCTTTTAGTCATGACATTTTTTATGCTCATTGCAAAGCCTGTCTTTTTGCCGGCATCAACATCAGTGGAATCAATGGAGAAGTGATGCTTGGTCAGTGGGAATTCCAAGTTGGTCCATCAGTTGGTATCTCTGCTGGGGACGAGATATGGGTTGCTCGTTACACTTTGGAGATAATCATTGAGGTTGCTGATTTAGTTCTTATCTTTGACCCTAAACCAGTTAAGGGTGATTGGAATGGTGTTGGTGCTCACACAAACTATAGCACCAAGTCTATGAGAGAAGAAGGTGGATATGAAATCATCAAGAAAGCAATTGAGAAGCTTAGGAAGAGGCACGCCAAGCACATTACTGCTTGTGGAGAAGGCAAAGAGCGCCGATTGACAGGGAAACATGAAACAACTGACATTAATACCTTCTCATGGTTGAAAATAAGAATTCATTGGATAGTTCAATAG 924 0.4177 MKDILSMDLKRLSPHETRKIHFSSLDMAYAFYNQYAKMNGFAICRSKILRSKKGEILQRAFVCHRQGFRDLIENIPHAIFKDPFRRGNHILVMCDAYTPAGEPIPSNKRHAAAKVFSHPDVVAEETWYGIKQEYTLLQKDINWPLGWPAGGYPGPHAFSHDIFYAHCKACLFAGINISGINGEVMLGQWEFQVGPSVGISAGDEIWVARYTLEIIIEVADLVLIFDPKPVKGDWNGVGAHTNYSTKSMREEGGYEIIKKAIEKLRKRHAKHITACGEGKERRLTGKHETTDINTFSWLKIRIHWIVQ 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02641 307 SMART Gln_synt_C_2 105 301 IPR008146 GO:0004356|GO:0006807
Vivi3g02641 307 Gene3D Glutamine synthetase/guanido kinase, catalytic domain 106 306 - -
Vivi3g02641 307 FunFam Glutamine synthetase 106 300 - -
Vivi3g02641 307 PANTHER GLUTAMINE SYNTHETASE 76 297 - -
Vivi3g02641 307 Pfam Glutamine synthetase, catalytic domain 160 245 IPR008146 GO:0004356|GO:0006807
Vivi3g02641 307 SUPERFAMILY Glutamine synthetase/guanido kinase 106 294 IPR014746 GO:0003824
Vivi3g02641 307 Gene3D - 51 105 IPR036651 GO:0004356|GO:0006542|GO:0006807
Vivi3g02641 307 Pfam FAR1 DNA-binding domain 31 71 IPR004330 -
Vivi3g02641 307 SUPERFAMILY Glutamine synthetase, N-terminal domain 77 104 IPR036651 GO:0004356|GO:0006542|GO:0006807
Vivi3g02641 307 ProSiteProfiles Glutamine synthetase (GS) catalytic domain profile. 108 307 IPR008146 GO:0004356|GO:0006807
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02641 Vivi-Chr3 44358986 44363865 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi3g02641 Gln-synt_C 4.6e-07 CL0286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02641 K01915 - rcu:8279712 386.726