Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02603 ATGTCGACCCCATTCCACCGTCGATCTCAATCGGAGGTACATTTCCGAATCCCCGACGACTTCGACCTTGAAATGGATCCCTTCGACTTCGACGCCTCTCCGCTCCATTTTCAAGATCCACAACCACACGACGATCTCCTCTCTTCCTACATTGATTCCGACAATTCCGGATCCAAACTCAACTCTCCTCCTCCCAATGCAGATACCGGCAGGCCCGGTCACCGCCGTAGCAACTCCGCCGATACATCTTCTTCCATGTTATCAGAAGGAATCGAATCTAAGAAGGCTATGTCCCCTGATAAACTCGCTCAATTATGGACCGTTGATCCGAAACGAGCCAAGAGGATTCTGGCTAACCGTCAATCTGCTGCACGTTCGAAAGAGAGGAAAGCTTGTTACGTGGTTGAGCTTGAAAGGAAAATTCATACTCTTCAAACTGAAGCAACTACTCTTTCTGCTCAATTAAATCTTTTCCAGAGAGATACAAGTGGTCTGTCTAGTGAAAATACCGAGTTGAAGCTTCGGTTACAAGGCATGGAGCAACAAGCTAAGTTATGTGATGCTCTAAATGAAGCCTTGAAGAATGAAGTTGATAGGCTGAAGGTTGCTACTGGAGAGGTAACAACCCATGCTGATACATATGGCTTGGGAATGCATCAACTTTCATATTCTCAAGCTTCACCCTTCATGCACCAGCCACAACATGGTCAGAACGAACTTCGGGCCATGCAAATGCAGCAGTTTCATTCATACTCATCTAACACATCCAATCCCCACCAGCCTCAGTTTGATCTACCCACTTCATATGATTTGTCAGAAATGCTGTCAAGTGATTCTATCGGCCAGTTTCAGGGGCTGGATATTGGCCACAGGGTTTCTCATGTTCTGATGCCTGATGGTCCCTCCGTTTCTGTTAATAAAACCAACAACGCCTTTTGA 939 0.4633 MSTPFHRRSQSEVHFRIPDDFDLEMDPFDFDASPLHFQDPQPHDDLLSSYIDSDNSGSKLNSPPPNADTGRPGHRRSNSADTSSSMLSEGIESKKAMSPDKLAQLWTVDPKRAKRILANRQSAARSKERKACYVVELERKIHTLQTEATTLSAQLNLFQRDTSGLSSENTELKLRLQGMEQQAKLCDALNEALKNEVDRLKVATGEVTTHADTYGLGMHQLSYSQASPFMHQPQHGQNELRAMQMQQFHSYSSNTSNPHQPQFDLPTSYDLSEMLSSDSIGQFQGLDIGHRVSHVLMPDGPSVSVNKTNNAF 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02603 312 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 109 172 IPR004827 GO:0003700|GO:0006355
Vivi3g02603 312 Pfam bZIP transcription factor 111 169 IPR004827 GO:0003700|GO:0006355
Vivi3g02603 312 SMART brlzneu 107 171 IPR004827 GO:0003700|GO:0006355
Vivi3g02603 312 MobiDBLite consensus disorder prediction 28 95 - -
Vivi3g02603 312 SUPERFAMILY Leucine zipper domain 111 165 IPR046347 GO:0003700|GO:0006355
Vivi3g02603 312 Coils Coil 176 196 - -
Vivi3g02603 312 CDD bZIP_plant_RF2 112 161 IPR044759 GO:0003700|GO:0006355
Vivi3g02603 312 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 5 255 - -
Vivi3g02603 312 MobiDBLite consensus disorder prediction 48 65 - -
Vivi3g02603 312 Gene3D - 110 177 - -
Vivi3g02603 312 Coils Coil 134 154 - -
Vivi3g02603 312 FunFam probable transcription factor PosF21 110 163 - -
Vivi3g02603 312 MobiDBLite consensus disorder prediction 72 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02603 Vivi-Chr3 43861281 43864677 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02603 4 288 bZIP Transcription Factor Family AT2G40620 50.769 5.97e-88 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi3g02603 bZIP_1 8.3e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02603 - - aprc:113852914 455.677