Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02534 ATGATGTCTACAACCAATATTGCTAACCACCACAGTTTGTTTGATGAAGAACATCAAGATCATGAGATCCCTATGCAGATGGGATTCAATATTCCTTTCCCTCCAAACATGACTTTACCTCCTTTAGGTAATTGCCATGATCAATCTTTGAAAGGTATCAGTGCAATAATAACTCCTGAAGCTACAACGTTTGCTGAAACATTACTAGCAACACCTGTTCAAAAACAAAGAGAATTTGAAGATCTTGCTTCGGGTTTTGGTGGTGGAGTAGGCCAAAACCTTGACTTAAACAGATCCAGAATGAATTCATGGGTATGGGGAGAAGTAAGTGATTGCTGGATGGGTAAAAGAAATAATGGAGGAGATGATCATAATCATATAGGGGTTTCAGCAGCTATAAAGATGAAGAAAATGAAAGGAAGAAGGAAGGTGAGGGAACCTAGGTTTTGCTTCAAAACAATGAGTGATGTAGATGTGTTGGATGATGGATACAAATGGAGGAAGTACGGACAGAAAGTGGTCAAGAACACTCAGCATCCCAGAAGCTACTACCGTTGCACACAAGACACATGTCGAGTAAAGAAACGTGTAGAGCGACTAGCTGAAGATCCAAGAATGGTGATAACCACATATGAAGGAAGACATGCTCACTCTCCATCAAACGAACTTGAAGAATCACAAACTCAATCTGAACTTGCTAATTTCTTCTGGTAG 714 0.3992 MMSTTNIANHHSLFDEEHQDHEIPMQMGFNIPFPPNMTLPPLGNCHDQSLKGISAIITPEATTFAETLLATPVQKQREFEDLASGFGGGVGQNLDLNRSRMNSWVWGEVSDCWMGKRNNGGDDHNHIGVSAAIKMKKMKGRRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDTCRVKKRVERLAEDPRMVITTYEGRHAHSPSNELEESQTQSELANFFW 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02534 237 ProSiteProfiles WRKY domain profile. 155 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi3g02534 237 Pfam WRKY DNA -binding domain 161 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi3g02534 237 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 120 222 IPR044810 GO:0003700
Vivi3g02534 237 FunFam WRKY transcription factor 57 146 220 - -
Vivi3g02534 237 SMART WRKY_cls 160 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi3g02534 237 SUPERFAMILY WRKY DNA-binding domain 152 219 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi3g02534 237 Gene3D WRKY domain 145 220 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02534 Vivi-Chr3 42742713 42745723 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02534 122 237 WRKY Transcription Factor Family AT4G39410 74.797 7.03e-63 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi3g02534 WRKY 1.5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02534 - - gmx:100127389 330.102