Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02509 ATGGGTGAACAATTTGGTCCATATTTAGCAATGTTTTTAGTACAATTAATATATGCTGGGATGACTTTGCTGTCTAAATCTGTGTTTAATGGAGGAATGAAAACATCTGTGTTTGTCTTTTATAGACAATTTGTTGGAGCCATTATCATGGTTGTTTTATCTTTGATATTTGAACGAAAACAAGCTGTGCCAGTGACTTTCTCGTTCATGACTATCTTCAAGATTTTCATGCTTTCATTATTGGGACTTACTTTAGCTTTGAATGTTAATGGTATTGCCCTTGCTTATACTTCTGCTATGTTGGCTGCTGCAATAGTTAACAGTCTTCCTGCTTCAACATTATTCTTCGCTGTTCTACTCAGAGTAGAGAAAGTAAATTTAAGGACAAAATCTGGAATTGTAAAAATAGGAAGTGTATTATTATGCATGGCCGGTGTGTCGATATTGGCGTTTTACAAGGGGCCTCAATTGCATATTGTGCATCATCATCGCGATGATTGGCAACATAAGGATCATTTTTCATATAACAATAAATGGATTTTGGGTTCTTTACTCTTGTTCTTATCAACCATCATGTGGAGCTTGTGGCTTGTACTTCAGTCTCAGTTGTTGAAAAGTTACCCTTCAAAATTAACATTCATGAGTATTCAGAGTGTATCAAGTGCAATTCAGTCATTTGGCATTGCCATTGCTTTTGAAAGAGATTTTGAGCAGTGGAAGTTAGGTTGGAACATGAGACTATTAGCAGTTGTTTATTGTGGGATATTAGTGACTGCAGTTGCTTACTATTTGCAAGCATTGGTGATTGAGAAGAAAGGACCAGTTTTTCCAGCAACTTGGAACCCACTCAGTTTTATTATTGCCACCATTGGTTCTGTGATACTATTGGATGAGCCACTATTTTTAGGAAGTGTTTTAGGTGGAATTTTGCTGGTTTTAAGTTTGTACACTGTTTTATGGGAAAAAAGCAAAGAAGGAATCACTCATAATCACAATTCTTTACCTATTCAACCATATAAAGAATGTGCAGAAATAAAAACAGAGGTCCCGTGTAGCAAGCCACCCCAATGA 1071 0.3623 MGEQFGPYLAMFLVQLIYAGMTLLSKSVFNGGMKTSVFVFYRQFVGAIIMVVLSLIFERKQAVPVTFSFMTIFKIFMLSLLGLTLALNVNGIALAYTSAMLAAAIVNSLPASTLFFAVLLRVEKVNLRTKSGIVKIGSVLLCMAGVSILAFYKGPQLHIVHHHRDDWQHKDHFSYNNKWILGSLLLFLSTIMWSLWLVLQSQLLKSYPSKLTFMSIQSVSSAIQSFGIAIAFERDFEQWKLGWNMRLLAVVYCGILVTAVAYYLQALVIEKKGPVFPATWNPLSFIIATIGSVILLDEPLFLGSVLGGILLVLSLYTVLWEKSKEGITHNHNSLPIQPYKECAEIKTEVPCSKPPQ 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02509 356 PANTHER WAT1-RELATED PROTEIN 7 326 IPR030184 GO:0016020|GO:0022857
Vivi3g02509 356 Pfam EamA-like transporter family 7 136 IPR000620 GO:0016020
Vivi3g02509 356 Pfam EamA-like transporter family 181 319 IPR000620 GO:0016020
Vivi3g02509 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 239 323 - -
Vivi3g02509 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 41 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02509 Vivi-Chr3 42038232 42044407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02509 3 253 Nodulin-like Gene Family AT5G64700 50.575 7.34e-74 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02509 - - vun:114162763 439.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g02509 3 42038232 42044407 Vivi3g02509 3 42038232 42044407 ECH