Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02472 ATGACCAACACCCATCTCAGAAAACCCTTTAAACAACTCCACATCCCAATCTTCACATCCACCCTCTTCCTCCTCTCCATGGCAACCCTCTCCTTCCTCTTCCTCTTCCTCTGTCTCTCCATCTCCCACTCTCACTCCTCCCTCAATCTCCACATCCAACAAGCCTGCAAATCAACCCGCTTCCCTCACCAATGCCAAATCTCCCTCTCCTCACATTCCCACAACCTTCCCTCAAACCCTAACCCCCTCCACATCATCCATTCCGCAATCTCACTCTCTTCCTTAAACCTTAATATCGCTCAATCATTGCTGAATTCCATCCTAGACGCTTCCGCAGGCAACCAAACCCGCGTCAATGTCGCCAAAAGCTGCCTCCAGGCTTTTCAATACTCTCACCATAGAACCTCTCTTACCATTGACGCGCTCTCACGTGGCAGAATCAAAGACGCACGTGCCTTCATGACTGCCGCATTGTCTTATCAGTATAACTGCTGGTCCGGTCTTAAATACGCTAACGACACTTCGTTGGTTTTTAAAACGATGTCGTTTCTTGAATCTCTTACCGGCCTCTCCAGCAATGCTCTTAGCATGATTCTCTCTTATGATCTCTTTGGTAATGATACTGATTCATGGAGGCCGCCTCGCACTGAGCGCGACGGTTTTTGGGAGGATTCGGGGTCGGGTGTGTTCGGGCCGGGACCCTCGGTGCCTGGGAATCTTACGCCGGATGTTAAGGTGTGTAAGGACGTGGGCAATGGGTGTTACGGAACGATTCAGGAAGCGGTTGATGCCGCGCCTGATAATGTGGATGTTGGTGGAGGGAGGAGATTTGTGATACATATAAAGAAAGGGGTTTATGAAGAGACGGTTAGGATTCCGTTGAGGAAGAGGAATGTTGTGTTTTTGGGGGATGGCATTGGTAAGACTGTCATCACTGGCTCTGCAAGTGTCGGACTACAAAAGGGGATGACAACGTATGACTCCGCCACCGTAGGGGTTGTTGGCGATGGATTCATGGCGAAGGATCTCACATTCGAAAACACAGCAGGTGCTAATGCACACCAAGCAGTAGCATTCAGATCAGACAGTGATCTTTCTGTTATTGAGAATTGTGAATTCATAGGCAATCAAGATACTCTCTATGCTCATTCCCTGCGTCAGTTTTATAAATCTTGTCGTATCATAGGTAATGTGGACTTCATATTTGGAAACTCAGCTTCATTCTTCCAAGACTGTGAAATCCTAGTCCAGCCTAGGCAAGCAAGGCCAAAGAAAGGGGAGAACAATGCCATTACTGCACATGGCAGAACAGACCCTGCTCAGTCGACAGGTTTTGTTTTTCACAATTGCATGATTAATGGTACCGAAAAATATATGGAGTTGTATTACGACAAGCCTAAAGTACACAAGAACTATCTCGGAAGGCCATGGAAGGAGTATTCTAGAACAGTTTTTATTAATTCGTTCATGGAAGCCTTAATCACACCACAGGGTTGGATGCCATGGACTGGAGATTTTGGACTGAATACCCTCTACTATGGGGAAATCAACAACTCTGGACCTGGTTCTAATTTGACTAAGAGAGTGTCCTGGAGTAGCCAGGTTCCTGCTGAACATGTGTACACGTATTCAGTGCAGGGTTTTATTCAAGGAGATGATTGGGATAGCCGGATCAGTTATTAG 1683 0.4694 MTNTHLRKPFKQLHIPIFTSTLFLLSMATLSFLFLFLCLSISHSHSSLNLHIQQACKSTRFPHQCQISLSSHSHNLPSNPNPLHIIHSAISLSSLNLNIAQSLLNSILDASAGNQTRVNVAKSCLQAFQYSHHRTSLTIDALSRGRIKDARAFMTAALSYQYNCWSGLKYANDTSLVFKTMSFLESLTGLSSNALSMILSYDLFGNDTDSWRPPRTERDGFWEDSGSGVFGPGPSVPGNLTPDVKVCKDVGNGCYGTIQEAVDAAPDNVDVGGGRRFVIHIKKGVYEETVRIPLRKRNVVFLGDGIGKTVITGSASVGLQKGMTTYDSATVGVVGDGFMAKDLTFENTAGANAHQAVAFRSDSDLSVIENCEFIGNQDTLYAHSLRQFYKSCRIIGNVDFIFGNSASFFQDCEILVQPRQARPKKGENNAITAHGRTDPAQSTGFVFHNCMINGTEKYMELYYDKPKVHKNYLGRPWKEYSRTVFINSFMEALITPQGWMPWTGDFGLNTLYYGEINNSGPGSNLTKRVSWSSQVPAEHVYTYSVQGFIQGDDWDSRISY 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02472 560 Gene3D - 238 560 IPR012334 -
Vivi3g02472 560 Gene3D Invertase/pectin methylesterase inhibitor family protein 49 200 IPR035513 -
Vivi3g02472 560 NCBIfam pectinesterase inhibitor domain 30 196 IPR006501 GO:0004857
Vivi3g02472 560 Pfam Plant invertase/pectin methylesterase inhibitor 52 197 IPR006501 GO:0004857
Vivi3g02472 560 SMART PMEI_2 47 197 IPR006501 GO:0004857
Vivi3g02472 560 CDD PMEI-like_3 55 198 - -
Vivi3g02472 560 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 52 198 IPR035513 -
Vivi3g02472 560 FunFam Probable pectinesterase/pectinesterase inhibitor 51 50 200 - -
Vivi3g02472 560 SUPERFAMILY Pectin lyase-like 247 556 IPR011050 -
Vivi3g02472 560 PANTHER PECTINESTERASE 33 554 - -
Vivi3g02472 560 FunFam Pectinesterase 238 560 - -
Vivi3g02472 560 Pfam Pectinesterase 243 552 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02472 Vivi-Chr3 41442009 41444606 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02472 46 556 Carbohydrate Esterase AT5G09760 63.830 0.0 679
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02472 - - gmx:100802102 764.607