Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02450 ATGCCCACGTGGTGGGGTAAAAAAGCAACCAAGACCAAGGACCTTCTTCACCAAGAAGAGCCACGTGGCGGAAGCAGCAGTGGTGGAAGTAGCGGCGGCGGCGGTGTGCTTCATTTTAATTTTAATAAGTCTCCGATTAGAAACGCTGCCAATTATAAAAACGGTTATTATAAACCAGAAAACCCTAGGAGTTTTGAAGATGCTTCTAATTTTAGAAATTCTCCCAGATCTAGTAGAGATTTCACTCCTTCAACCACCACCACCACCACCGCCGCCGGTGGTTCTTCTTCCTTTTGGGATTCCGAAGCCGGTGATAAGATAGGGCATCCTTTGCCGCGTCCTTCTGTTTCTTCTACGCAAAGCTTGAGTAATGATCAGGGGATTACTTTTGGCTCTGCTTCTGTTTCTGGCTCTAGCGTTAGCTCCAATGGCTCCTGTGATGATCCTTTGGCTTTTAACTCCCAGATTAATAGCGTTAGGGGACAATGTGAAACAAAGTTCAATATGAGGTCTAAAAGCCCTGGTCCTGGGTCAAGAGGACCTACCAGCCCAACATCACCTCTTCATCCAAGGTTGCATGTTTTGAGTCTTGACTCACCTACTGGCAGGCAAGAAGATGGAAGGAGTGAGTGTCATCCATTGCCTCTTCCTCCAGGATCTCCGACTAGTCCATCTTCAGCTCTTCCAAACAACGCGAGACCAAATGGAATGGTAGAAAATTGTGCCACTAACCGTGGCAGGTGGAAGAAAGGAAAGCTTCTAGGTCGGGGAACATTTGGGCATGTTTACTTGGGATTCAATAGTGAAAGCGGACAATTGTGTGCAATAAAAGAAGTCAGGGCTGTATGTGATGATCCAACCTCAAAAGAGTGCCTCAAACAACTTAATCAGGAGATAACTTTGCTGAGTCAACTTTCACATCCAAACATTGTTCAATACTATGGAAGTGATTTGGGAGAAGAAACACTTTCCGTTTATTTGGAATACGTCTCTGGAGGTTCTATTCATAAATTACTTCAGGAATATGGGTCCTTCAAAGAGCCTGTCATTCAGAATTATACAAGGCAGATTGTCTCCGGACTTTCATATCTTCATGGGAGAAATACAGTGCATAGGGATATCAAAGGGGCTAACATACTAGTTGATCCTAATGGTGAAATCAAGCTGGCGGACTTTGGAATGGCTAAACATATAAATTCTTCATCCTCAATGCTTTCTTTCAAAGGAAGTCCACATTGGATGGCGCCAGAGGTTGTAATGAATACAAATGGCTATAGTCTTCCTGTTGATATTTGGAGCTTGGGATGCACAATTCTTGAAATGGCAACATCGAGGCCTCCTTGGAGTCAGTATGAAGGGGTAGCTGCAATATTTAAAATTGGCAACAGCAAAGACATGCCTGAAATTCCTGATCATCTCTCAAATGATGCAAAGAATTTCATTAAGCTATGCTTGCATAGAGATCCTGCAACTCGCCCTACAGCCCATATGTTACTTAATCACCCCTTTATTCGAGATCAGTCAGCAACAAAAGCTGCAAATGTCAGAATAACCAAGGATGCTTTTCCCTACATGTTCGATGGAAGCAGGACGCCGCCCGCTTCGGATCTACATTCCAATAGAAACTGTATTTCTTCTCATGATGCAGATCATGCAACAAAGCCAGTTGTTGCATCTTCCCGAGCAATAAGGAGCCCAAGAGACAACACAAGAATGATCACATCCTTACCAGTATCTCCGTGTTCAAGTCCATTGCGACAGTCCGGTCCGGTACACAAGAGCTGTTTCCTTTCTCCTCCACATCCAAATTATTCTATGATGGGACATCATACCCTTGCTTCATATGAATCATATCCAATGAGATCAAATGCCAAGTTTACTCTTGATCCTTGGCAAGAAAACCCTATGTACAAAGCCCACACACCTGGTGGATCCCCAAGGAGACTTATATGA 1953 0.4393 MPTWWGKKATKTKDLLHQEEPRGGSSSGGSSGGGGVLHFNFNKSPIRNAANYKNGYYKPENPRSFEDASNFRNSPRSSRDFTPSTTTTTTAAGGSSSFWDSEAGDKIGHPLPRPSVSSTQSLSNDQGITFGSASVSGSSVSSNGSCDDPLAFNSQINSVRGQCETKFNMRSKSPGPGSRGPTSPTSPLHPRLHVLSLDSPTGRQEDGRSECHPLPLPPGSPTSPSSALPNNARPNGMVENCATNRGRWKKGKLLGRGTFGHVYLGFNSESGQLCAIKEVRAVCDDPTSKECLKQLNQEITLLSQLSHPNIVQYYGSDLGEETLSVYLEYVSGGSIHKLLQEYGSFKEPVIQNYTRQIVSGLSYLHGRNTVHRDIKGANILVDPNGEIKLADFGMAKHINSSSSMLSFKGSPHWMAPEVVMNTNGYSLPVDIWSLGCTILEMATSRPPWSQYEGVAAIFKIGNSKDMPEIPDHLSNDAKNFIKLCLHRDPATRPTAHMLLNHPFIRDQSATKAANVRITKDAFPYMFDGSRTPPASDLHSNRNCISSHDADHATKPVVASSRAIRSPRDNTRMITSLPVSPCSSPLRQSGPVHKSCFLSPPHPNYSMMGHHTLASYESYPMRSNAKFTLDPWQENPMYKAHTPGGSPRRLI 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02450 650 MobiDBLite consensus disorder prediction 1 128 - -
Vivi3g02450 650 CDD STKc_MEKK1_plant 247 504 - -
Vivi3g02450 650 MobiDBLite consensus disorder prediction 66 97 - -
Vivi3g02450 650 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 91 513 - -
Vivi3g02450 650 FunFam Mitogen-activated protein kinase kinase kinase 246 528 - -
Vivi3g02450 650 MobiDBLite consensus disorder prediction 167 185 - -
Vivi3g02450 650 MobiDBLite consensus disorder prediction 113 128 - -
Vivi3g02450 650 MobiDBLite consensus disorder prediction 167 238 - -
Vivi3g02450 650 SMART serkin_6 248 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g02450 650 ProSiteProfiles Protein kinase domain profile. 248 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g02450 650 ProSitePatterns Protein kinases ATP-binding region signature. 254 277 IPR017441 GO:0005524
Vivi3g02450 650 SUPERFAMILY Protein kinase-like (PK-like) 245 578 IPR011009 -
Vivi3g02450 650 Pfam Protein kinase domain 249 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g02450 650 Gene3D Transferase(Phosphotransferase) domain 1 245 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02450 Vivi-Chr3 41149079 41154157 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02450 1 567 MAP Kinase Kinase Kinase AT1G53570 56.477 0.0 547
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Vivi3g02450 Pkinase 1.4e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02450 K04421 - gmx:100813122 890.567