Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g02440 ATGGGAGATAGAGGAAACAGAACAGATGCATATATAGTGTGTTATGCACCAACCATGATTACAACAAATGGAATATGGCAAGGAGATAACCCTTTGGATTATTCTCTCCCACTTTTCATCTTGCAATTAACTTTAGTCGTTGCAGCCACTCGCATGTTTGTCTTTATTCTCAGGCCCTTTCGCCAGCCACGTGTCATAGCCGAAATTCTGGGCGGGGTAGTATTAGGTCCTTCGGTGCTTGGAAAAAGCGAAGTATTTGCCAATGCGATTTTCCCTCTAAGAAGTGTGATGGTGATTGAAACAATGGCGAACGTTGGTTTACTTTATTTCCTCTTCTTGGTTGGTGTGGAGATGGACGTAACTATTTTGCGCAGCGTAGGGAGAAAGGCGGTCTTTGCAGCGATTTCTGGCATGGTTTTGCCTTTCATCATTGGTGCTTCTTTTTCCTTCCTTTCGAATAGGCATACTCTTAACAGTGACATAAACCAAGGAACTTATATTCTGTTCCTCGGCGTCGCTCTATCTGTCACTGCTTTTCCTGTCTTAGCTCGAATCCTCGCCGAGCTAAAACTTATTAACACGGATTTAGGAAGGCTCGCTCTTTCGTCTGCACTCATTAATGACGTGTGCGCTTGGATTCTCTTGGCTTTAGCAATTGCACTGGCTGAAAATGAAACAAGTTCTTTTGCTTCCCTTTGGGTTTTATTGTCGGGCGCAGCGTTTGTCGCCTTTTGTATTTACGCCGTTCGACCAGCAGCCTCATGGGTAGTTAGGAAAACACCTGAAGGTGAATCATTCAGTGAATTCTATATATCTCTTATATTAGCCGGTGTCATGATCTCCGGTTTCATCACCGATGCTATTGGAACACATTCTGTTTTCGGAGCTTTTGTGTTTGGTTTAGCAATTCCGAGTGGACCACTTGGTGTTACACTTGTGGAAAAGCTTGAGGATTTTGTTTCGGGACTTCTGCTCCCTCTATTTTTCGCAATCAGTGGGTTAAAAACCGATATAGGACTCGTACGAGGGTCTTGGACTTGGAGTATTCTTATTTTTGTCATTTTTCTTGCTTGCATTGGCAAAATTATTGGAACTCTAGCTGTTGCATTCTTTTATCAAATGCCGATCCGCGAAGGCGCTACCCTCGGATTGCTCATGAACACAAAAGGCCTTATTGAATTGATTGTTCTCAATGTTGGAAAGGACCAAAAGATTTTCGATGAAGCATCATTTGCCGTCATGGTGGTTATAACCGTAATAATGACCGGAGTAGTTGTACCTGTTGTATCGATAATTTATAGACCATCAAGGGGAAACATAAATTACAAAAGAAGATCAATTCAGATATCAAAACCTGATGGAGAATTTAGAATACTAGTTTGTGTCCATAGTCCTCGAAATGTGCCAACAATGATCAACCTCCTTGAAGCCTCGAATCCAACAAAGAATTCGCCTATATGTCTCTACATGCTTCATTTGGTCGAACTCAGCGGCCGCACATCAGCAATGCTTATTGTCCACAACACAACAAAACCAGAACAGGTAGCACTTAACCGAACGGAAGCTCAATCCGATCACATAATCACCGCATTTAAAAACTACGAACAAAACACTTCATTCGTCTCGGTCCAGCCATTAACAGCAGTTTCCCCTTACTCAACAATGCATGAAGATATATGCAATTTAGCACAAGAGAAGCGCGTATCGCTAATCATCATTCCCTTTCATAAACAACAAACAGTCGATGGTGGAATGGAACCTACAAACATGTCATTTCGAACAATCAACCAAAACGTACTAGCAAACGCACCGTGCTCGGTCGGAATCCTAGTCGATAGAGGCTTAAACGGTTTAAACCGCCTAGACTCAAACCAAGTATCACATCATGTAGCAATAATGTTCTTCGGTGGACCAGACGACAGAGAAGCGTTATGCTACGGATGGAGAATGTTCGAACATACAGCTATAAGCCTAACCATAATGCGGTTTGTCCCGGGCGAAAAAGTAAGCGAACCAGTTCATCAACACGGAATCAATCCAGACGAACCAAGCGTGCTAACAGTTGAAACAGATAATGATATAGAAAAACGAATTGACGATAAACTAATACACGAGTTTAGAATGAGATACCTGAACGATGATTCGTTTAACTACTTTGAGAAAGTAGTTAACAATGGAGAGGAAACAGTAGCAGCAATAAGAACAATGGATGATATACATGATCTATTTATAGTTGGAAGAGGTCATGGAATGATATCGCCATTGACAGCAGGGTTAACTGATTGGAGTGAGTGTCCTGAGATGGGTGCAATAGGTGATTTGTTAGCTTCATCAGATTTTGCAGCAAGTGCTTCAGTTTTGGTAGTGCAACAATATGTTGGATTAGGATCAAATGGTGATGGATTAGAAACACCAGTTGATAGTGAAGAATTTTATAATAATAGTGTTGACATAACTCATCATTCAGGAGCATCAAGAAGACATACTGTTTTTAATACAGAAAGAATAACTCCCCATAGTTTATAG 2526 0.4133 MGDRGNRTDAYIVCYAPTMITTNGIWQGDNPLDYSLPLFILQLTLVVAATRMFVFILRPFRQPRVIAEILGGVVLGPSVLGKSEVFANAIFPLRSVMVIETMANVGLLYFLFLVGVEMDVTILRSVGRKAVFAAISGMVLPFIIGASFSFLSNRHTLNSDINQGTYILFLGVALSVTAFPVLARILAELKLINTDLGRLALSSALINDVCAWILLALAIALAENETSSFASLWVLLSGAAFVAFCIYAVRPAASWVVRKTPEGESFSEFYISLILAGVMISGFITDAIGTHSVFGAFVFGLAIPSGPLGVTLVEKLEDFVSGLLLPLFFAISGLKTDIGLVRGSWTWSILIFVIFLACIGKIIGTLAVAFFYQMPIREGATLGLLMNTKGLIELIVLNVGKDQKIFDEASFAVMVVITVIMTGVVVPVVSIIYRPSRGNINYKRRSIQISKPDGEFRILVCVHSPRNVPTMINLLEASNPTKNSPICLYMLHLVELSGRTSAMLIVHNTTKPEQVALNRTEAQSDHIITAFKNYEQNTSFVSVQPLTAVSPYSTMHEDICNLAQEKRVSLIIIPFHKQQTVDGGMEPTNMSFRTINQNVLANAPCSVGILVDRGLNGLNRLDSNQVSHHVAIMFFGGPDDREALCYGWRMFEHTAISLTIMRFVPGEKVSEPVHQHGINPDEPSVLTVETDNDIEKRIDDKLIHEFRMRYLNDDSFNYFEKVVNNGEETVAAIRTMDDIHDLFIVGRGHGMISPLTAGLTDWSECPEMGAIGDLLASSDFAASASVLVVQQYVGLGSNGDGLETPVDSEEFYNNSVDITHHSGASRRHTVFNTERITPHSL 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g02440 841 Gene3D - 38 438 IPR038770 -
Vivi3g02440 841 PANTHER CATION/H + ANTIPORTER 13 792 - -
Vivi3g02440 841 FunFam Cation/H(+) antiporter 15 38 439 - -
Vivi3g02440 841 Pfam Sodium/hydrogen exchanger family 46 428 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g02440 Vivi-Chr3 41055319 41058346 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g02440 8 810 Antiporter Super Family AT2G13620 68.734 0.0 1119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g02440 K26731 - gmx:100818927 1243.41